Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
IFT43Q96FT9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.45■■□□□ 1.5
IFT43Q96FT9 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
IFT43Q96FT9 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.45■■□□□ 1.5
IFT43Q96FT9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.44■■□□□ 1.5
IFT43Q96FT9 DUSP8P4-201ENST00000399538 1761 ntBASIC24.44■■□□□ 1.5
IFT43Q96FT9 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
IFT43Q96FT9 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
IFT43Q96FT9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.44■■□□□ 1.5
IFT43Q96FT9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
IFT43Q96FT9 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
IFT43Q96FT9 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
IFT43Q96FT9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
IFT43Q96FT9 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
IFT43Q96FT9 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.44■■□□□ 1.5
IFT43Q96FT9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
IFT43Q96FT9 ERN1-208ENST00000606895 2068 ntBASIC24.44■■□□□ 1.5
IFT43Q96FT9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
IFT43Q96FT9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
IFT43Q96FT9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
IFT43Q96FT9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
IFT43Q96FT9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.43■■□□□ 1.5
IFT43Q96FT9 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
IFT43Q96FT9 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
IFT43Q96FT9 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
IFT43Q96FT9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.42■■□□□ 1.5
IFT43Q96FT9 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
IFT43Q96FT9 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
IFT43Q96FT9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.41■■□□□ 1.5
IFT43Q96FT9 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
IFT43Q96FT9 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.41■■□□□ 1.5
IFT43Q96FT9 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
IFT43Q96FT9 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
IFT43Q96FT9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.4■■□□□ 1.5
IFT43Q96FT9 AC010501.1-201ENST00000606270 1962 ntBASIC24.4■■□□□ 1.5
IFT43Q96FT9 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
IFT43Q96FT9 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
IFT43Q96FT9 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.4■■□□□ 1.5
IFT43Q96FT9 RAP2CP1-202ENST00000605179 643 ntBASIC24.4■■□□□ 1.5
IFT43Q96FT9 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
IFT43Q96FT9 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
IFT43Q96FT9 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
IFT43Q96FT9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
IFT43Q96FT9 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.4■■□□□ 1.5
IFT43Q96FT9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
IFT43Q96FT9 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
IFT43Q96FT9 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
IFT43Q96FT9 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
IFT43Q96FT9 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
IFT43Q96FT9 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
IFT43Q96FT9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.39■■□□□ 1.49
IFT43Q96FT9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.38■■□□□ 1.49
IFT43Q96FT9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.38■■□□□ 1.49
IFT43Q96FT9 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.38■■□□□ 1.49
IFT43Q96FT9 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.38■■□□□ 1.49
IFT43Q96FT9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
IFT43Q96FT9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.38■■□□□ 1.49
IFT43Q96FT9 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.38■■□□□ 1.49
IFT43Q96FT9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.38■■□□□ 1.49
IFT43Q96FT9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
IFT43Q96FT9 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
IFT43Q96FT9 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
IFT43Q96FT9 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
IFT43Q96FT9 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
IFT43Q96FT9 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
IFT43Q96FT9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
IFT43Q96FT9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
IFT43Q96FT9 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC24.36■■□□□ 1.49
IFT43Q96FT9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
IFT43Q96FT9 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
IFT43Q96FT9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.35■■□□□ 1.49
IFT43Q96FT9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.35■■□□□ 1.49
IFT43Q96FT9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
IFT43Q96FT9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.35■■□□□ 1.49
IFT43Q96FT9 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
IFT43Q96FT9 AC093323.1-202ENST00000635031 2045 ntBASIC24.35■■□□□ 1.49
IFT43Q96FT9 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
IFT43Q96FT9 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
IFT43Q96FT9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
IFT43Q96FT9 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
IFT43Q96FT9 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
IFT43Q96FT9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
IFT43Q96FT9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
IFT43Q96FT9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
IFT43Q96FT9 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
IFT43Q96FT9 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
IFT43Q96FT9 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
IFT43Q96FT9 DUX4L18-201ENST00000553347 1267 ntBASIC24.32■■□□□ 1.48
IFT43Q96FT9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.31■■□□□ 1.48
IFT43Q96FT9 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC24.31■■□□□ 1.48
IFT43Q96FT9 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.31■■□□□ 1.48
IFT43Q96FT9 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
IFT43Q96FT9 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
IFT43Q96FT9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.31■■□□□ 1.48
IFT43Q96FT9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.31■■□□□ 1.48
IFT43Q96FT9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
IFT43Q96FT9 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
IFT43Q96FT9 RARRES2P1-201ENST00000474487 481 ntBASIC24.3■■□□□ 1.48
IFT43Q96FT9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.3■■□□□ 1.48
IFT43Q96FT9 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms