Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SYNPOQ8N3V7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
SYNPOQ8N3V7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
SYNPOQ8N3V7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
SYNPOQ8N3V7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SYNPOQ8N3V7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SYNPOQ8N3V7 MIR935-201ENST00000401179 91 ntBASIC24.43■■□□□ 1.5
SYNPOQ8N3V7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.43■■□□□ 1.5
SYNPOQ8N3V7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
SYNPOQ8N3V7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SYNPOQ8N3V7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SYNPOQ8N3V7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.43■■□□□ 1.5
SYNPOQ8N3V7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SYNPOQ8N3V7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SYNPOQ8N3V7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.42■■□□□ 1.5
SYNPOQ8N3V7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SYNPOQ8N3V7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SYNPOQ8N3V7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.42■■□□□ 1.5
SYNPOQ8N3V7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SYNPOQ8N3V7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SYNPOQ8N3V7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.42■■□□□ 1.5
SYNPOQ8N3V7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SYNPOQ8N3V7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
SYNPOQ8N3V7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SYNPOQ8N3V7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SYNPOQ8N3V7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SYNPOQ8N3V7 AC092028.1-203ENST00000608262 953 ntBASIC24.41■■□□□ 1.5
SYNPOQ8N3V7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SYNPOQ8N3V7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
SYNPOQ8N3V7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SYNPOQ8N3V7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SYNPOQ8N3V7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SYNPOQ8N3V7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SYNPOQ8N3V7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.4■■□□□ 1.5
SYNPOQ8N3V7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.4■■□□□ 1.5
SYNPOQ8N3V7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.4■■□□□ 1.5
SYNPOQ8N3V7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SYNPOQ8N3V7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SYNPOQ8N3V7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.5
SYNPOQ8N3V7 TSPY9P-201ENST00000440215 945 ntBASIC24.39■■□□□ 1.49
SYNPOQ8N3V7 TSPY11P-201ENST00000442607 1045 ntBASIC24.39■■□□□ 1.49
SYNPOQ8N3V7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.39■■□□□ 1.49
SYNPOQ8N3V7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.39■■□□□ 1.49
SYNPOQ8N3V7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
SYNPOQ8N3V7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.38■■□□□ 1.49
SYNPOQ8N3V7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SYNPOQ8N3V7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
SYNPOQ8N3V7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
SYNPOQ8N3V7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SYNPOQ8N3V7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SYNPOQ8N3V7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
SYNPOQ8N3V7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SYNPOQ8N3V7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
SYNPOQ8N3V7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.37■■□□□ 1.49
SYNPOQ8N3V7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.37■■□□□ 1.49
SYNPOQ8N3V7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
SYNPOQ8N3V7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SYNPOQ8N3V7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SYNPOQ8N3V7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
SYNPOQ8N3V7 MIR638-201ENST00000385237 100 ntBASIC24.36■■□□□ 1.49
SYNPOQ8N3V7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
SYNPOQ8N3V7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SYNPOQ8N3V7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.35■■□□□ 1.49
SYNPOQ8N3V7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.35■■□□□ 1.49
SYNPOQ8N3V7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.35■■□□□ 1.49
SYNPOQ8N3V7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SYNPOQ8N3V7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SYNPOQ8N3V7 BX255925.1-201ENST00000566954 1854 ntBASIC24.35■■□□□ 1.49
SYNPOQ8N3V7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SYNPOQ8N3V7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.35■■□□□ 1.49
SYNPOQ8N3V7 AL139246.5-201ENST00000606645 996 ntBASIC24.35■■□□□ 1.49
SYNPOQ8N3V7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.35■■□□□ 1.49
SYNPOQ8N3V7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.35■■□□□ 1.49
SYNPOQ8N3V7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.34■■□□□ 1.49
SYNPOQ8N3V7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.34■■□□□ 1.49
SYNPOQ8N3V7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SYNPOQ8N3V7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.33■■□□□ 1.49
SYNPOQ8N3V7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SYNPOQ8N3V7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SYNPOQ8N3V7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.33■■□□□ 1.49
SYNPOQ8N3V7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.33■■□□□ 1.49
SYNPOQ8N3V7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.33■■□□□ 1.49
SYNPOQ8N3V7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SYNPOQ8N3V7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
SYNPOQ8N3V7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SYNPOQ8N3V7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.32■■□□□ 1.48
SYNPOQ8N3V7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
SYNPOQ8N3V7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SYNPOQ8N3V7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SYNPOQ8N3V7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SYNPOQ8N3V7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SYNPOQ8N3V7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
SYNPOQ8N3V7 MIR4281-201ENST00000580852 62 ntBASIC24.31■■□□□ 1.48
SYNPOQ8N3V7 RALB-208ENST00000631312 311 ntTSL 5 BASIC24.31■■□□□ 1.48
SYNPOQ8N3V7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.31■■□□□ 1.48
SYNPOQ8N3V7 LINC01003-201ENST00000564834 1764 ntBASIC24.31■■□□□ 1.48
SYNPOQ8N3V7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
SYNPOQ8N3V7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SYNPOQ8N3V7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.3■■□□□ 1.48
SYNPOQ8N3V7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 263.3 ms