Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
COL23A1Q86Y22 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC30.65■■■□□ 2.5
COL23A1Q86Y22 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC30.65■■■□□ 2.5
COL23A1Q86Y22 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
COL23A1Q86Y22 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
COL23A1Q86Y22 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC30.64■■■□□ 2.5
COL23A1Q86Y22 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
COL23A1Q86Y22 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
COL23A1Q86Y22 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
COL23A1Q86Y22 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
COL23A1Q86Y22 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
COL23A1Q86Y22 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
COL23A1Q86Y22 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
COL23A1Q86Y22 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
COL23A1Q86Y22 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
COL23A1Q86Y22 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC30.62■■■□□ 2.49
COL23A1Q86Y22 RASSF1-AS1-201ENST00000629828 790 ntBASIC30.62■■■□□ 2.49
COL23A1Q86Y22 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC30.62■■■□□ 2.49
COL23A1Q86Y22 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
COL23A1Q86Y22 EXOG-217ENST00000630638 197 ntTSL 5 BASIC30.61■■■□□ 2.49
COL23A1Q86Y22 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
COL23A1Q86Y22 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
COL23A1Q86Y22 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC30.6■■■□□ 2.49
COL23A1Q86Y22 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
COL23A1Q86Y22 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC30.59■■■□□ 2.49
COL23A1Q86Y22 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC30.59■■■□□ 2.49
COL23A1Q86Y22 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
COL23A1Q86Y22 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC30.58■■■□□ 2.49
COL23A1Q86Y22 AC106739.1-201ENST00000617035 715 ntBASIC30.58■■■□□ 2.49
COL23A1Q86Y22 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
COL23A1Q86Y22 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC30.58■■■□□ 2.49
COL23A1Q86Y22 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
COL23A1Q86Y22 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.49
COL23A1Q86Y22 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.49
COL23A1Q86Y22 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
COL23A1Q86Y22 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC30.57■■■□□ 2.48
COL23A1Q86Y22 PBX2P1-201ENST00000493219 1291 ntBASIC30.57■■■□□ 2.48
COL23A1Q86Y22 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
COL23A1Q86Y22 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
COL23A1Q86Y22 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.57■■■□□ 2.48
COL23A1Q86Y22 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
COL23A1Q86Y22 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
COL23A1Q86Y22 AK3-203ENST00000447596 705 ntTSL 2 BASIC30.56■■■□□ 2.48
COL23A1Q86Y22 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
COL23A1Q86Y22 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC30.56■■■□□ 2.48
COL23A1Q86Y22 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
COL23A1Q86Y22 AC135279.3-201ENST00000610945 1311 ntBASIC30.55■■■□□ 2.48
COL23A1Q86Y22 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
COL23A1Q86Y22 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC30.55■■■□□ 2.48
COL23A1Q86Y22 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
COL23A1Q86Y22 AC142381.2-201ENST00000566120 298 ntBASIC30.54■■■□□ 2.48
COL23A1Q86Y22 AC104564.3-201ENST00000582367 638 ntBASIC30.54■■■□□ 2.48
COL23A1Q86Y22 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC30.54■■■□□ 2.48
COL23A1Q86Y22 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC30.54■■■□□ 2.48
COL23A1Q86Y22 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
COL23A1Q86Y22 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC30.53■■■□□ 2.48
COL23A1Q86Y22 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
COL23A1Q86Y22 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
COL23A1Q86Y22 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC30.52■■■□□ 2.48
COL23A1Q86Y22 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC30.52■■■□□ 2.48
COL23A1Q86Y22 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
COL23A1Q86Y22 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
COL23A1Q86Y22 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC30.51■■■□□ 2.48
COL23A1Q86Y22 TK2-202ENST00000417693 1046 ntTSL 2 BASIC30.51■■■□□ 2.47
COL23A1Q86Y22 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
COL23A1Q86Y22 AL031432.3-201ENST00000607698 485 ntBASIC30.51■■■□□ 2.47
COL23A1Q86Y22 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
COL23A1Q86Y22 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
COL23A1Q86Y22 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC30.5■■■□□ 2.47
COL23A1Q86Y22 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
COL23A1Q86Y22 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
COL23A1Q86Y22 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
COL23A1Q86Y22 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC30.49■■■□□ 2.47
COL23A1Q86Y22 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
COL23A1Q86Y22 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC30.49■■■□□ 2.47
COL23A1Q86Y22 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
COL23A1Q86Y22 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC30.48■■■□□ 2.47
COL23A1Q86Y22 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
COL23A1Q86Y22 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC30.48■■■□□ 2.47
COL23A1Q86Y22 SUDS3P1-201ENST00000505831 966 ntBASIC30.48■■■□□ 2.47
COL23A1Q86Y22 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC30.48■■■□□ 2.47
COL23A1Q86Y22 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC30.48■■■□□ 2.47
COL23A1Q86Y22 AL449106.1-201ENST00000608517 1980 ntBASIC30.48■■■□□ 2.47
COL23A1Q86Y22 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC30.47■■■□□ 2.47
COL23A1Q86Y22 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
COL23A1Q86Y22 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC30.47■■■□□ 2.47
COL23A1Q86Y22 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC30.47■■■□□ 2.47
COL23A1Q86Y22 CLTA-210ENST00000540080 989 ntTSL 2 BASIC30.47■■■□□ 2.47
COL23A1Q86Y22 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC30.47■■■□□ 2.47
COL23A1Q86Y22 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
COL23A1Q86Y22 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
COL23A1Q86Y22 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
COL23A1Q86Y22 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC30.46■■■□□ 2.47
COL23A1Q86Y22 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
COL23A1Q86Y22 LGR4-203ENST00000480977 492 ntTSL 2 BASIC30.46■■■□□ 2.47
COL23A1Q86Y22 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
COL23A1Q86Y22 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
COL23A1Q86Y22 MIR5787-201ENST00000611784 55 ntBASIC30.46■■■□□ 2.47
COL23A1Q86Y22 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
COL23A1Q86Y22 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC30.45■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms