Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL20P78556 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL20P78556 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC18.82■□□□□ 0.6
CCL20P78556 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCL20P78556 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL20P78556 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL20P78556 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.82■□□□□ 0.6
CCL20P78556 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL20P78556 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL20P78556 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CCL20P78556 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL20P78556 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.82■□□□□ 0.6
CCL20P78556 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCL20P78556 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.81■□□□□ 0.6
CCL20P78556 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL20P78556 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.81■□□□□ 0.6
CCL20P78556 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.81■□□□□ 0.6
CCL20P78556 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCL20P78556 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCL20P78556 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCL20P78556 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCL20P78556 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCL20P78556 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.8■□□□□ 0.6
CCL20P78556 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCL20P78556 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCL20P78556 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCL20P78556 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCL20P78556 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCL20P78556 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCL20P78556 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCL20P78556 LINC00273-201ENST00000539813 1452 ntBASIC18.79■□□□□ 0.6
CCL20P78556 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCL20P78556 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC18.79■□□□□ 0.6
CCL20P78556 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCL20P78556 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCL20P78556 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCL20P78556 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCL20P78556 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL20P78556 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.78■□□□□ 0.6
CCL20P78556 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.78■□□□□ 0.6
CCL20P78556 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCL20P78556 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCL20P78556 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCL20P78556 EBPL-202ENST00000378268 680 ntTSL 3 BASIC18.77■□□□□ 0.6
CCL20P78556 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCL20P78556 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCL20P78556 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCL20P78556 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCL20P78556 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCL20P78556 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCL20P78556 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCL20P78556 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCL20P78556 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCL20P78556 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCL20P78556 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCL20P78556 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
CCL20P78556 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCL20P78556 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCL20P78556 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
CCL20P78556 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.74■□□□□ 0.59
CCL20P78556 AL117328.2-201ENST00000624617 1940 ntBASIC18.74■□□□□ 0.59
CCL20P78556 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CCL20P78556 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCL20P78556 AC004812.2-201ENST00000611079 2094 ntBASIC18.74■□□□□ 0.59
CCL20P78556 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCL20P78556 AC141586.4-201ENST00000624558 1573 ntBASIC18.74■□□□□ 0.59
CCL20P78556 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC18.74■□□□□ 0.59
CCL20P78556 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCL20P78556 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CCL20P78556 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC18.74■□□□□ 0.59
CCL20P78556 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCL20P78556 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCL20P78556 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCL20P78556 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCL20P78556 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.74■□□□□ 0.59
CCL20P78556 ABCB10P4-201ENST00000566803 2184 ntBASIC18.74■□□□□ 0.59
CCL20P78556 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.74■□□□□ 0.59
CCL20P78556 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCL20P78556 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCL20P78556 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.73■□□□□ 0.59
CCL20P78556 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.73■□□□□ 0.59
CCL20P78556 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCL20P78556 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCL20P78556 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCL20P78556 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCL20P78556 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCL20P78556 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.73■□□□□ 0.59
CCL20P78556 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.73■□□□□ 0.59
CCL20P78556 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CCL20P78556 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
CCL20P78556 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CCL20P78556 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.72■□□□□ 0.59
CCL20P78556 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCL20P78556 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCL20P78556 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCL20P78556 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.72■□□□□ 0.59
CCL20P78556 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCL20P78556 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCL20P78556 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.72■□□□□ 0.59
CCL20P78556 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms