Protein–RNA interactions for Protein: O60930

RNASEH1, Ribonuclease H1, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNASEH1O60930 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RNASEH1O60930 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNASEH1O60930 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.41■■□□□ 1.5
RNASEH1O60930 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.41■■□□□ 1.5
RNASEH1O60930 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RNASEH1O60930 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.41■■□□□ 1.5
RNASEH1O60930 AC019171.1-201ENST00000601251 1056 ntBASIC24.41■■□□□ 1.5
RNASEH1O60930 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RNASEH1O60930 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RNASEH1O60930 AC103834.1-201ENST00000520383 144 ntBASIC24.4■■□□□ 1.5
RNASEH1O60930 AL035685.1-201ENST00000636663 812 ntBASIC24.4■■□□□ 1.5
RNASEH1O60930 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
RNASEH1O60930 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RNASEH1O60930 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RNASEH1O60930 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RNASEH1O60930 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.39■■□□□ 1.49
RNASEH1O60930 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
RNASEH1O60930 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RNASEH1O60930 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RNASEH1O60930 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNASEH1O60930 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.38■■□□□ 1.49
RNASEH1O60930 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.38■■□□□ 1.49
RNASEH1O60930 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNASEH1O60930 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNASEH1O60930 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.38■■□□□ 1.49
RNASEH1O60930 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNASEH1O60930 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.38■■□□□ 1.49
RNASEH1O60930 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.37■■□□□ 1.49
RNASEH1O60930 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNASEH1O60930 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.37■■□□□ 1.49
RNASEH1O60930 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RNASEH1O60930 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNASEH1O60930 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC24.36■■□□□ 1.49
RNASEH1O60930 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNASEH1O60930 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNASEH1O60930 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNASEH1O60930 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.36■■□□□ 1.49
RNASEH1O60930 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
RNASEH1O60930 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNASEH1O60930 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RNASEH1O60930 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.35■■□□□ 1.49
RNASEH1O60930 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
RNASEH1O60930 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.35■■□□□ 1.49
RNASEH1O60930 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
RNASEH1O60930 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
RNASEH1O60930 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.34■■□□□ 1.49
RNASEH1O60930 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNASEH1O60930 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.33■■□□□ 1.49
RNASEH1O60930 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
RNASEH1O60930 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RNASEH1O60930 LONRF2P2-201ENST00000439212 571 ntBASIC24.33■■□□□ 1.49
RNASEH1O60930 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.33■■□□□ 1.49
RNASEH1O60930 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
RNASEH1O60930 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
RNASEH1O60930 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
RNASEH1O60930 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNASEH1O60930 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.32■■□□□ 1.48
RNASEH1O60930 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.32■■□□□ 1.48
RNASEH1O60930 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
RNASEH1O60930 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNASEH1O60930 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNASEH1O60930 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNASEH1O60930 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.32■■□□□ 1.48
RNASEH1O60930 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.32■■□□□ 1.48
RNASEH1O60930 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNASEH1O60930 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNASEH1O60930 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNASEH1O60930 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNASEH1O60930 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RNASEH1O60930 AL031848.2-201ENST00000607670 837 ntBASIC24.31■■□□□ 1.48
RNASEH1O60930 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RNASEH1O60930 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RNASEH1O60930 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
RNASEH1O60930 AC009299.2-201ENST00000482477 511 ntBASIC24.3■■□□□ 1.48
RNASEH1O60930 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNASEH1O60930 AC103724.3-201ENST00000564481 992 ntBASIC24.29■■□□□ 1.48
RNASEH1O60930 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC24.29■■□□□ 1.48
RNASEH1O60930 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
RNASEH1O60930 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RNASEH1O60930 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.28■■□□□ 1.48
RNASEH1O60930 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC24.28■■□□□ 1.48
RNASEH1O60930 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
RNASEH1O60930 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RNASEH1O60930 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RNASEH1O60930 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RNASEH1O60930 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
RNASEH1O60930 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.27■■□□□ 1.48
RNASEH1O60930 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RNASEH1O60930 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RNASEH1O60930 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RNASEH1O60930 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RNASEH1O60930 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC24.27■■□□□ 1.48
RNASEH1O60930 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RNASEH1O60930 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RNASEH1O60930 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RNASEH1O60930 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RNASEH1O60930 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.26■■□□□ 1.47
RNASEH1O60930 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RNASEH1O60930 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
RNASEH1O60930 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms