Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV6A0A075B6T7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV6A0A075B6T7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV6A0A075B6T7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV6A0A075B6T7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.38■□□□□ 0.85
TRAV6A0A075B6T7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV6A0A075B6T7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV6A0A075B6T7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV6A0A075B6T7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV6A0A075B6T7 AP003733.4-201ENST00000623785 1697 ntBASIC20.38■□□□□ 0.85
TRAV6A0A075B6T7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV6A0A075B6T7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TRAV6A0A075B6T7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV6A0A075B6T7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV6A0A075B6T7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV6A0A075B6T7 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV6A0A075B6T7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.37■□□□□ 0.85
TRAV6A0A075B6T7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV6A0A075B6T7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV6A0A075B6T7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.37■□□□□ 0.85
TRAV6A0A075B6T7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TRAV6A0A075B6T7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV6A0A075B6T7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV6A0A075B6T7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.36■□□□□ 0.85
TRAV6A0A075B6T7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV6A0A075B6T7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV6A0A075B6T7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TRAV6A0A075B6T7 C9orf163-202ENST00000624034 2573 ntBASIC20.36■□□□□ 0.85
TRAV6A0A075B6T7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV6A0A075B6T7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV6A0A075B6T7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV6A0A075B6T7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV6A0A075B6T7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.35■□□□□ 0.85
TRAV6A0A075B6T7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TRAV6A0A075B6T7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV6A0A075B6T7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TRAV6A0A075B6T7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.35■□□□□ 0.85
TRAV6A0A075B6T7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV6A0A075B6T7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV6A0A075B6T7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV6A0A075B6T7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV6A0A075B6T7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.34■□□□□ 0.85
TRAV6A0A075B6T7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV6A0A075B6T7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV6A0A075B6T7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV6A0A075B6T7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV6A0A075B6T7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV6A0A075B6T7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV6A0A075B6T7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV6A0A075B6T7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.33■□□□□ 0.85
TRAV6A0A075B6T7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRAV6A0A075B6T7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRAV6A0A075B6T7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.33■□□□□ 0.84
TRAV6A0A075B6T7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.33■□□□□ 0.84
TRAV6A0A075B6T7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV6A0A075B6T7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV6A0A075B6T7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV6A0A075B6T7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV6A0A075B6T7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV6A0A075B6T7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV6A0A075B6T7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.32■□□□□ 0.84
TRAV6A0A075B6T7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TRAV6A0A075B6T7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV6A0A075B6T7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV6A0A075B6T7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV6A0A075B6T7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV6A0A075B6T7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.3■□□□□ 0.84
TRAV6A0A075B6T7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.3■□□□□ 0.84
TRAV6A0A075B6T7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV6A0A075B6T7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV6A0A075B6T7 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.3■□□□□ 0.84
TRAV6A0A075B6T7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TRAV6A0A075B6T7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV6A0A075B6T7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV6A0A075B6T7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TRAV6A0A075B6T7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV6A0A075B6T7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV6A0A075B6T7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TRAV6A0A075B6T7 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV6A0A075B6T7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV6A0A075B6T7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV6A0A075B6T7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TRAV6A0A075B6T7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.29■□□□□ 0.84
TRAV6A0A075B6T7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV6A0A075B6T7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV6A0A075B6T7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV6A0A075B6T7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV6A0A075B6T7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TRAV6A0A075B6T7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.28■□□□□ 0.84
TRAV6A0A075B6T7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TRAV6A0A075B6T7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV6A0A075B6T7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV6A0A075B6T7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV6A0A075B6T7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.27■□□□□ 0.84
TRAV6A0A075B6T7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV6A0A075B6T7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV6A0A075B6T7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.27■□□□□ 0.84
TRAV6A0A075B6T7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV6A0A075B6T7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV6A0A075B6T7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms