Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 EIF4H-204ENST00000489484 831 ntTSL 214.78□□□□□ -0.044e-11■■□□□ 12
XRN2Q9H0D6 CCDC85C-202ENST00000554877 543 ntTSL 414.76□□□□□ -0.059e-6■■□□□ 12
XRN2Q9H0D6 BANP-219ENST00000485772 608 ntTSL 514.53□□□□□ -0.084e-11■■□□□ 12
XRN2Q9H0D6 PKM-224ENST00000569857 1355 ntTSL 514.24□□□□□ -0.134e-11■■□□□ 12
XRN2Q9H0D6 CCDC85C-205ENST00000556348 556 ntTSL 514.15□□□□□ -0.149e-6■■□□□ 12
XRN2Q9H0D6 BANP-222ENST00000526460 547 ntTSL 413.75□□□□□ -0.214e-11■■□□□ 12
XRN2Q9H0D6 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.219e-6■■□□□ 12
XRN2Q9H0D6 DNAJB6-211ENST00000459889 7992 ntTSL 1 (best)13.67□□□□□ -0.229e-6■■□□□ 12
XRN2Q9H0D6 DUXAP10-206ENST00000614614 712 ntTSL 3 BASIC13.43□□□□□ -0.264e-11■■□□□ 12
XRN2Q9H0D6 C19orf54-209ENST00000598485 553 ntTSL 5 BASIC13.43□□□□□ -0.265e-6■■□□□ 12
XRN2Q9H0D6 DUXAP10-207ENST00000616922 642 ntTSL 1 (best)13.41□□□□□ -0.264e-11■■□□□ 12
XRN2Q9H0D6 DNAJB6-207ENST00000441291 614 ntTSL 313.25□□□□□ -0.299e-6■■□□□ 12
XRN2Q9H0D6 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC12.96□□□□□ -0.344e-11■■□□□ 12
XRN2Q9H0D6 DNAJB6-203ENST00000417758 852 ntTSL 512.95□□□□□ -0.349e-6■■□□□ 12
XRN2Q9H0D6 DUXAP10-209ENST00000619784 903 ntTSL 312.94□□□□□ -0.344e-11■■□□□ 12
XRN2Q9H0D6 CCDC85C-203ENST00000554996 619 ntTSL 412.23□□□□□ -0.459e-6■■□□□ 12
XRN2Q9H0D6 PKM-211ENST00000564276 753 ntTSL 1 (best)11.51□□□□□ -0.574e-11■■□□□ 12
XRN2Q9H0D6 CCDC85C-207ENST00000557769 3793 ntTSL 2 BASIC10.5□□□□□ -0.739e-6■■□□□ 12
XRN2Q9H0D6 DNAJB6-217ENST00000488001 551 ntTSL 410.46□□□□□ -0.739e-6■■□□□ 12
XRN2Q9H0D6 BANP-213ENST00000466197 640 ntTSL 510.44□□□□□ -0.744e-11■■□□□ 12
XRN2Q9H0D6 BANP-212ENST00000459966 627 ntTSL 210.06□□□□□ -0.84e-11■■□□□ 12
XRN2Q9H0D6 CCDC85C-201ENST00000380243 16393 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.89e-6■■□□□ 12
XRN2Q9H0D6 BANP-210ENST00000454563 558 ntTSL 49.89□□□□□ -0.834e-11■■□□□ 12
XRN2Q9H0D6 BANP-225ENST00000569400 802 ntTSL 49.7□□□□□ -0.864e-11■■□□□ 12
XRN2Q9H0D6 CTNNA1-223ENST00000520520 484 ntTSL 39.64□□□□□ -0.874e-11■■□□□ 12
XRN2Q9H0D6 CTNNA1-243ENST00000540387 2684 ntTSL 1 (best) BASIC9.39□□□□□ -0.914e-11■■□□□ 12
XRN2Q9H0D6 CTNNA1-230ENST00000521724 2741 ntTSL 28.89□□□□□ -0.994e-11■■□□□ 12
XRN2Q9H0D6 RERE-216ENST00000505225 533 ntTSL 28.67□□□□□ -1.024e-11■■□□□ 12
XRN2Q9H0D6 BANP-205ENST00000412691 586 ntTSL 48.49□□□□□ -1.054e-11■■□□□ 12
XRN2Q9H0D6 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC8.33□□□□□ -1.084e-11■■□□□ 12
XRN2Q9H0D6 DUXAP10-205ENST00000612696 4119 ntTSL 1 (best)8.22□□□□□ -1.094e-11■■□□□ 12
XRN2Q9H0D6 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.184e-11■■□□□ 12
XRN2Q9H0D6 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.39□□□□□ -1.234e-11■■□□□ 12
XRN2Q9H0D6 EIF4H-203ENST00000479338 573 ntTSL 25.1□□□□□ -1.594e-11■■□□□ 12
XRN2Q9H0D6 NECAB3-221ENST00000607055 554 ntTSL 424.52■■□□□ 1.524e-8■■□□□ 12
XRN2Q9H0D6 LRP1-208ENST00000555124 550 ntTSL 417.13■□□□□ 0.334e-8■■□□□ 12
XRN2Q9H0D6 RHBDF2-216ENST00000592123 935 ntTSL 526.16■■□□□ 1.781e-6■■□□□ 12
XRN2Q9H0D6 RHBDF2-218ENST00000593103 562 ntTSL 523.68■■□□□ 1.381e-6■■□□□ 12
XRN2Q9H0D6 RHBDF2-208ENST00000590288 734 ntTSL 423.5■■□□□ 1.351e-6■■□□□ 12
XRN2Q9H0D6 RHBDF2-203ENST00000585989 568 ntTSL 423.39■■□□□ 1.331e-6■■□□□ 12
XRN2Q9H0D6 RHBDF2-212ENST00000591697 613 ntTSL 423.18■■□□□ 1.31e-6■■□□□ 12
XRN2Q9H0D6 RHBDF2-217ENST00000592378 533 ntTSL 421.62■■□□□ 1.051e-6■■□□□ 12
XRN2Q9H0D6 RHBDF2-211ENST00000591255 545 ntTSL 421.32■■□□□ 11e-6■■□□□ 12
XRN2Q9H0D6 RHBDF2-215ENST00000591885 3599 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.721e-6■■□□□ 12
XRN2Q9H0D6 RHBDF2-201ENST00000313080 3582 ntTSL 1 (best) BASIC10.36□□□□□ -0.751e-6■■□□□ 12
XRN2Q9H0D6 D2HGDH-214ENST00000473126 1612 ntTSL 1 (best)27.31■■□□□ 1.962e-6■■□□□ 12
XRN2Q9H0D6 D2HGDH-215ENST00000486953 2232 ntTSL 1 (best)22.91■■□□□ 1.262e-6■■□□□ 12
XRN2Q9H0D6 D2HGDH-213ENST00000470343 1026 ntTSL 1 (best)21.04■□□□□ 0.962e-6■■□□□ 12
XRN2Q9H0D6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.072e-7■■□□□ 12
XRN2Q9H0D6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.57■■□□□ 1.042e-7■■□□□ 12
XRN2Q9H0D6 PHF1-209ENST00000487667 1930 ntTSL 521.47■■□□□ 1.032e-7■■□□□ 12
XRN2Q9H0D6 FLNA-215ENST00000474358 696 ntTSL 221.15■□□□□ 0.982e-7■■□□□ 12
XRN2Q9H0D6 FLNA-209ENST00000444578 843 ntTSL 320.55■□□□□ 0.882e-7■■□□□ 12
XRN2Q9H0D6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.74■□□□□ 0.432e-7■■□□□ 12
XRN2Q9H0D6 PHF1-211ENST00000495509 1752 ntTSL 217.34■□□□□ 0.372e-7■■□□□ 12
XRN2Q9H0D6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.332e-7■■□□□ 12
XRN2Q9H0D6 PHF1-205ENST00000428274 836 ntTSL 515.55■□□□□ 0.082e-7■■□□□ 12
XRN2Q9H0D6 PHF1-210ENST00000488767 849 ntTSL 315.04■□□□□ -02e-7■■□□□ 12
XRN2Q9H0D6 LSS-210ENST00000491729 2143 ntTSL 214.04□□□□□ -0.161e-14■■□□□ 12
XRN2Q9H0D6 KIF2C-205ENST00000455186 908 ntTSL 513.81□□□□□ -0.22e-7■■□□□ 12
XRN2Q9H0D6 LSS-203ENST00000419093 517 ntTSL 311.04□□□□□ -0.641e-14■■□□□ 12
XRN2Q9H0D6 LSS-208ENST00000474319 3601 ntTSL 210.64□□□□□ -0.711e-14■■□□□ 12
XRN2Q9H0D6 KIF2C-202ENST00000372224 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.712e-7■■□□□ 12
XRN2Q9H0D6 KIF2C-204ENST00000452259 1124 ntTSL 58.92□□□□□ -0.982e-7■■□□□ 12
XRN2Q9H0D6 KIF2C-201ENST00000372217 2955 ntTSL 1 (best) BASIC8.87□□□□□ -0.992e-7■■□□□ 12
XRN2Q9H0D6 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.072e-7■■□□□ 12
XRN2Q9H0D6 KIF2C-208ENST00000493027 1091 ntTSL 56.9□□□□□ -1.32e-7■■□□□ 12
XRN2Q9H0D6 MARS-222ENST00000551172 699 ntTSL 310.93□□□□□ -0.664e-15■■□□□ 12
XRN2Q9H0D6 MARS-229ENST00000552499 555 ntTSL 35.43□□□□□ -1.544e-15■■□□□ 12
XRN2Q9H0D6 MARS-209ENST00000547665 670 ntTSL 24.7□□□□□ -1.664e-15■■□□□ 12
XRN2Q9H0D6 SH3BP2-210ENST00000505941 917 ntTSL 224.78■■□□□ 1.564e-7■■□□□ 12
XRN2Q9H0D6 SH3BP2-227ENST00000515183 566 ntTSL 417.19■□□□□ 0.344e-7■■□□□ 12
XRN2Q9H0D6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.37■■□□□ 1.013e-7■■□□□ 12
XRN2Q9H0D6 FDFT1-218ENST00000530664 1761 ntTSL 2 BASIC14.46□□□□□ -0.093e-7■■□□□ 12
XRN2Q9H0D6 SNRNP200-201ENST00000323853 7165 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.657e-8■■□□□ 12
XRN2Q9H0D6 EPS8L2-217ENST00000530452 704 ntTSL 322.43■■□□□ 1.184e-13■■□□□ 12
XRN2Q9H0D6 FLNA-216ENST00000490936 5374 ntTSL 1 (best)16.07■□□□□ 0.163e-7■■□□□ 12
XRN2Q9H0D6 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.28■■□□□ 1.484e-6■■□□□ 12
XRN2Q9H0D6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.484e-6■■□□□ 12
XRN2Q9H0D6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.84e-7■■□□□ 11.9
XRN2Q9H0D6 NARF-207ENST00000577410 873 ntTSL 529.4■■■□□ 2.33e-6■■□□□ 11.9
XRN2Q9H0D6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.09■■□□□ 1.293e-6■■□□□ 11.9
XRN2Q9H0D6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.03■■□□□ 1.283e-6■■□□□ 11.9
XRN2Q9H0D6 NARF-216ENST00000581202 1013 ntTSL 522.99■■□□□ 1.273e-6■■□□□ 11.9
XRN2Q9H0D6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.39■□□□□ 0.853e-6■■□□□ 11.9
XRN2Q9H0D6 NARF-218ENST00000581795 1430 ntTSL 219.84■□□□□ 0.773e-6■■□□□ 11.9
XRN2Q9H0D6 NARF-203ENST00000374611 1722 ntTSL 519.12■□□□□ 0.653e-6■■□□□ 11.9
XRN2Q9H0D6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.93■□□□□ 0.623e-6■■□□□ 11.9
XRN2Q9H0D6 NARF-208ENST00000577432 866 ntTSL 518.66■□□□□ 0.583e-6■■□□□ 11.9
XRN2Q9H0D6 NARF-220ENST00000582907 1454 ntTSL 516.71■□□□□ 0.273e-6■■□□□ 11.9
XRN2Q9H0D6 NARF-201ENST00000309794 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.423e-6■■□□□ 11.9
XRN2Q9H0D6 NARF-209ENST00000577812 2598 ntTSL 511.32□□□□□ -0.63e-6■■□□□ 11.9
XRN2Q9H0D6 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.542e-7■■□□□ 11.9
XRN2Q9H0D6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.09■□□□□ 0.332e-6■■□□□ 11.9
XRN2Q9H0D6 MSI2-207ENST00000579205 500 ntTSL 416.37■□□□□ 0.212e-6■■□□□ 11.9
XRN2Q9H0D6 CD164-208ENST00000506649 778 ntTSL 325.73■■□□□ 1.719e-11■■□□□ 11.9
XRN2Q9H0D6 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.44■□□□□ 0.229e-11■■□□□ 11.9
XRN2Q9H0D6 CCDC18-AS1-222ENST00000457025 413 ntTSL 511.15□□□□□ -0.629e-11■■□□□ 11.9
XRN2Q9H0D6 CCDC18-AS1-201ENST00000411670 675 ntTSL 510□□□□□ -0.819e-11■■□□□ 11.9
XRN2Q9H0D6 CCDC18-AS1-202ENST00000413606 770 ntTSL 39.43□□□□□ -0.99e-11■■□□□ 11.9
Retrieved 100 of 21,068 protein–RNA pairs in 141.8 ms