RNA–Protein interactions for RNA: ENST00000607055.1

NECAB3-221, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 4

Gene NECAB3, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-221ENST00000607055 NISCHQ9Y2I1 1504 aa51.31■■■■■ 5.8
NECAB3-221ENST00000607055 CCDC180Q9P1Z9 1646 aa45.3■■■■■ 4.84
NECAB3-221ENST00000607055 ABCC9O60706 1549 aa43.83■■■■■ 4.61
NECAB3-221ENST00000607055 ZCCHC6Q5VYS8 1495 aaKnown RBP42.87■■■■■ 4.45
NECAB3-221ENST00000607055 DCAF8L2P0C7V8 631 aa42.73■■■■■ 4.43
NECAB3-221ENST00000607055 NACADO15069 1562 aa42.45■■■■■ 4.39
NECAB3-221ENST00000607055 DCAF1Q9Y4B6 1507 aa42.43■■■■■ 4.38
NECAB3-221ENST00000607055 RB1CC1Q8TDY2 1594 aa42.37■■■■■ 4.37
NECAB3-221ENST00000607055 MYO15BQ96JP2 1530 aa42.36■■■■■ 4.37
NECAB3-221ENST00000607055 SCRIBQ14160 1630 aa41.47■■■■■ 4.23
NECAB3-221ENST00000607055 UNC13AQ9UPW8 1703 aa41.39■■■■■ 4.22
NECAB3-221ENST00000607055 PABPN1Q86U42 306 aaKnown RBP eCLIP41.09■■■■■ 4.17
NECAB3-221ENST00000607055 BICRAQ9NZM4 1560 aa41.06■■■■■ 4.16
NECAB3-221ENST00000607055 SHROOM4Q9ULL8 1493 aa41.03■■■■■ 4.16
NECAB3-221ENST00000607055 CECR2Q9BXF3 1484 aa39.94■■■■□ 3.98
NECAB3-221ENST00000607055 EIF4G1Q04637 1599 aaKnown RBP39.94■■■■□ 3.98
NECAB3-221ENST00000607055 BAZ1AQ9NRL2 1556 aaPredicted RBP39.72■■■■□ 3.95
NECAB3-221ENST00000607055 SMARCA4P51532 1647 aa39.69■■■■□ 3.94
NECAB3-221ENST00000607055 DNAJC5BQ9UF47 199 aa39.64■■■■□ 3.94
NECAB3-221ENST00000607055 CC2D2AQ9P2K1 1620 aa39.62■■■■□ 3.93
NECAB3-221ENST00000607055 MROH2BQ7Z745 1585 aa39.59■■■■□ 3.93
NECAB3-221ENST00000607055 RSF1Q96T23 1441 aaPredicted RBP39.35■■■■□ 3.89
NECAB3-221ENST00000607055 ATAD2BQ9ULI0 1458 aa39.31■■■■□ 3.88
NECAB3-221ENST00000607055 SMARCA2P51531 1590 aa39.28■■■■□ 3.88
NECAB3-221ENST00000607055 PEG3Q9GZU2 1588 aa39.24■■■■□ 3.87
NECAB3-221ENST00000607055 WIZO95785 1651 aa39.19■■■■□ 3.86
NECAB3-221ENST00000607055 NCAPD3P42695 1498 aa39.17■■■■□ 3.86
NECAB3-221ENST00000607055 BAZ1BQ9UIG0 1483 aaKnown RBP39.05■■■■□ 3.84
NECAB3-221ENST00000607055 HMGXB3Q12766 1538 aa39.04■■■■□ 3.84
NECAB3-221ENST00000607055 SUPT5HO00267 1087 aaKnown RBP38.92■■■■□ 3.82
NECAB3-221ENST00000607055 TOP2AP11388 1531 aaKnown RBP38.8■■■■□ 3.8
NECAB3-221ENST00000607055 CCDC88BA6NC98 1476 aa38.35■■■■□ 3.73
NECAB3-221ENST00000607055 NESP48681 1621 aa38.1■■■■□ 3.69
NECAB3-221ENST00000607055 CADPSQ9ULU8 1353 aa38.09■■■■□ 3.69
NECAB3-221ENST00000607055 LAMC3Q9Y6N6 1575 aa38.04■■■■□ 3.68
NECAB3-221ENST00000607055 CFTRP13569 1480 aa37.98■■■■□ 3.67
NECAB3-221ENST00000607055 PDS5BQ9NTI5 1447 aa37.78■■■■□ 3.64
NECAB3-221ENST00000607055 ERCC6Q03468 1493 aa37.72■■■■□ 3.63
NECAB3-221ENST00000607055 PRDM2Q13029 1718 aa37.71■■■■□ 3.63
NECAB3-221ENST00000607055 FANCD2Q9BXW9 1451 aa37.67■■■■□ 3.62
NECAB3-221ENST00000607055 KIF21AQ7Z4S6 1674 aa37.63■■■■□ 3.62
NECAB3-221ENST00000607055 CEP164Q9UPV0 1460 aa37.56■■■■□ 3.6
NECAB3-221ENST00000607055 MRC2Q9UBG0 1479 aa37.38■■■■□ 3.57
NECAB3-221ENST00000607055 THOC2Q8NI27 1593 aaKnown RBP37.34■■■■□ 3.57
NECAB3-221ENST00000607055 URB2Q14146 1524 aaKnown RBP37.26■■■■□ 3.55
NECAB3-221ENST00000607055 WDR62O43379 1518 aa37.2■■■■□ 3.55
NECAB3-221ENST00000607055 ABCC8Q09428 1581 aa37.17■■■■□ 3.54
NECAB3-221ENST00000607055 TOPBP1Q92547 1522 aa37.14■■■■□ 3.54
NECAB3-221ENST00000607055 DNMBPQ6XZF7 1577 aa37.13■■■■□ 3.53
NECAB3-221ENST00000607055 CUX1P39880 1505 aa37.1■■■■□ 3.53
NECAB3-221ENST00000607055 WRNQ14191 1432 aaPredicted RBP eCLIP37.1■■■■□ 3.536e-7■■■■■ 33.4
NECAB3-221ENST00000607055 CUX2O14529 1486 aa37.03■■■■□ 3.52
NECAB3-221ENST00000607055 SYNJ1O43426 1573 aa36.97■■■■□ 3.51
NECAB3-221ENST00000607055 TOP2BQ02880 1626 aa36.92■■■■□ 3.5
NECAB3-221ENST00000607055 BIVM-ERCC5R4GMW8 1640 aa36.9■■■■□ 3.5
NECAB3-221ENST00000607055 FGD5Q6ZNL6 1462 aa36.88■■■■□ 3.49
NECAB3-221ENST00000607055 POLA1P09884 1462 aaPredicted RBP36.86■■■■□ 3.49
NECAB3-221ENST00000607055 SOGA1O94964 1423 aa36.74■■■■□ 3.47
NECAB3-221ENST00000607055 IFT140Q96RY7 1462 aa36.74■■■■□ 3.47
NECAB3-221ENST00000607055 RAD54L2Q9Y4B4 1467 aa36.73■■■■□ 3.47
NECAB3-221ENST00000607055 TRIM41Q8WV44 630 aa36.69■■■■□ 3.46
NECAB3-221ENST00000607055 TARBP1Q13395 1621 aaKnown RBP36.66■■■■□ 3.46
NECAB3-221ENST00000607055 CHIC1Q5VXU3 224 aa36.65■■■■□ 3.46
NECAB3-221ENST00000607055 ZNF608Q9ULD9 1512 aaPredicted RBP36.54■■■■□ 3.44
NECAB3-221ENST00000607055 ABCA10Q8WWZ4 1543 aa36.52■■■■□ 3.44
NECAB3-221ENST00000607055 WDR97A6NE52 1622 aa36.5■■■■□ 3.43
NECAB3-221ENST00000607055 TDRD9Q8NDG6 1382 aaKnown RBP36.48■■■■□ 3.43
NECAB3-221ENST00000607055 AQRO60306 1485 aaKnown RBP eCLIP36.43■■■■□ 3.422e-8■■■■■ 36.9
NECAB3-221ENST00000607055 EIF4G3O43432 1585 aaKnown RBP36.4■■■■□ 3.42
NECAB3-221ENST00000607055 ABCA5Q8WWZ7 1642 aa36.32■■■■□ 3.4
NECAB3-221ENST00000607055 GAPVD1Q14C86 1478 aa36.31■■■■□ 3.4
NECAB3-221ENST00000607055 KIF27Q86VH2 1401 aa36.27■■■■□ 3.4
NECAB3-221ENST00000607055 GRIN2BQ13224 1484 aa36.22■■■■□ 3.39
NECAB3-221ENST00000607055 PBRM1Q86U86 1689 aa36.18■■■■□ 3.38
NECAB3-221ENST00000607055 RUSC2Q8N2Y8 1516 aa36.17■■■■□ 3.38
NECAB3-221ENST00000607055 SNAPC4Q5SXM2 1469 aa36.11■■■■□ 3.37
NECAB3-221ENST00000607055 ERICH3Q5RHP9 1530 aa36.08■■■■□ 3.37
NECAB3-221ENST00000607055 IGF1RP08069 1367 aa36.04■■■■□ 3.36
NECAB3-221ENST00000607055 MAGI1Q96QZ7 1491 aaPredicted RBP36.04■■■■□ 3.36
NECAB3-221ENST00000607055 FAM9AQ8IZU1 332 aaPredicted RBP35.98■■■■□ 3.35
NECAB3-221ENST00000607055 EEA1Q15075 1411 aa35.97■■■■□ 3.35
NECAB3-221ENST00000607055 ADAMTS12P58397 1594 aa35.94■■■■□ 3.34
NECAB3-221ENST00000607055 FHAD1B1AJZ9 1412 aa35.91■■■■□ 3.34
NECAB3-221ENST00000607055 FBLN2P98095 1184 aa35.91■■■■□ 3.34
NECAB3-221ENST00000607055 SYNJ2O15056 1496 aa35.9■■■■□ 3.34
NECAB3-221ENST00000607055 CUL7Q14999 1698 aa35.88■■■■□ 3.33
NECAB3-221ENST00000607055 CHMP7Q8WUX9 453 aaPredicted RBP35.88■■■■□ 3.33
NECAB3-221ENST00000607055 CSRNP3Q8WYN3 585 aa35.88■■■■□ 3.33
NECAB3-221ENST00000607055 CARMIL1Q5VZK9 1371 aa35.85■■■■□ 3.33
NECAB3-221ENST00000607055 CHD1O14646 1710 aa35.83■■■■□ 3.33
NECAB3-221ENST00000607055 GRIN2AQ12879 1464 aa35.75■■■■□ 3.31
NECAB3-221ENST00000607055 PRXQ9BXM0 1461 aa35.72■■■■□ 3.31
NECAB3-221ENST00000607055 RAPGEF2Q9Y4G8 1499 aa35.7■■■■□ 3.31
NECAB3-221ENST00000607055 OSCARQ8IYS5 282 aa35.65■■■■□ 3.3
NECAB3-221ENST00000607055 DNAJC5Q9H3Z4 198 aa35.61■■■■□ 3.29
NECAB3-221ENST00000607055 CEP170Q5SW79 1584 aa35.55■■■■□ 3.28
NECAB3-221ENST00000607055 KIF21BO75037 1637 aa35.55■■■■□ 3.28
NECAB3-221ENST00000607055 NUP160Q12769 1436 aa35.55■■■■□ 3.28
NECAB3-221ENST00000607055 EHMT2Q96KQ7 1210 aa35.51■■■■□ 3.28
NECAB3-221ENST00000607055 CLASP1Q7Z460 1538 aa35.44■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms