Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC23.22■■□□□ 1.31
TMC1Q8TDI8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC23.22■■□□□ 1.31
TMC1Q8TDI8 AC099398.1-201ENST00000567919 2776 ntBASIC23.22■■□□□ 1.31
TMC1Q8TDI8 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TMC1Q8TDI8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TMC1Q8TDI8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TMC1Q8TDI8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 FAM58DP-201ENST00000428076 619 ntBASIC23.21■■□□□ 1.31
TMC1Q8TDI8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 SPCS2P4-201ENST00000436160 681 ntBASIC23.21■■□□□ 1.31
TMC1Q8TDI8 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 AC069335.1-201ENST00000489972 472 ntBASIC23.21■■□□□ 1.31
TMC1Q8TDI8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 AC109635.5-201ENST00000533593 962 ntBASIC23.21■■□□□ 1.31
TMC1Q8TDI8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 AP001350.2-201ENST00000625104 1094 ntBASIC23.21■■□□□ 1.31
TMC1Q8TDI8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TMC1Q8TDI8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.31
TMC1Q8TDI8 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC23.2■■□□□ 1.3
TMC1Q8TDI8 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 HNRNPFP1-201ENST00000391730 1133 ntBASIC23.19■■□□□ 1.3
TMC1Q8TDI8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 AC025678.2-201ENST00000562061 970 ntBASIC23.19■■□□□ 1.3
TMC1Q8TDI8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 LSM12-202ENST00000585388 942 ntTSL 3 BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 CYP2A7P1-201ENST00000595391 815 ntBASIC23.19■■□□□ 1.3
TMC1Q8TDI8 AC009093.7-201ENST00000623853 1223 ntBASIC23.19■■□□□ 1.3
TMC1Q8TDI8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TMC1Q8TDI8 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms