Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CNIH3Q8TBE1 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.33■□□□□ 0.05
CNIH3Q8TBE1 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CNIH3Q8TBE1 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.05
CNIH3Q8TBE1 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.33■□□□□ 0.05
CNIH3Q8TBE1 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CNIH3Q8TBE1 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 MIR662-201ENST00000384847 95 ntBASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.33■□□□□ 0.04
CNIH3Q8TBE1 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 AL390719.2-201ENST00000606993 987 ntBASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 AL021920.2-201ENST00000624828 1351 ntBASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CNIH3Q8TBE1 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 AC132938.5-201ENST00000624980 1813 ntBASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms