Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CASC4Q6P4E1 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASC4Q6P4E1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASC4Q6P4E1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.1■□□□□ 0.33
CASC4Q6P4E1 PRELID1P1-202ENST00000567272 903 ntBASIC17.1■□□□□ 0.33
CASC4Q6P4E1 AL139424.1-201ENST00000607572 797 ntBASIC17.1■□□□□ 0.33
CASC4Q6P4E1 AL589182.2-201ENST00000619332 1049 ntBASIC17.1■□□□□ 0.33
CASC4Q6P4E1 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.1■□□□□ 0.33
CASC4Q6P4E1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.1■□□□□ 0.33
CASC4Q6P4E1 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.1■□□□□ 0.33
CASC4Q6P4E1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CASC4Q6P4E1 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASC4Q6P4E1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.1■□□□□ 0.33
CASC4Q6P4E1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.1■□□□□ 0.33
CASC4Q6P4E1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASC4Q6P4E1 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASC4Q6P4E1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.1■□□□□ 0.33
CASC4Q6P4E1 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CASC4Q6P4E1 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CASC4Q6P4E1 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASC4Q6P4E1 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 AC091304.2-201ENST00000564639 760 ntBASIC17.09■□□□□ 0.33
CASC4Q6P4E1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 AC008608.2-201ENST00000606089 416 ntBASIC17.09■□□□□ 0.33
CASC4Q6P4E1 AL355877.3-201ENST00000622820 899 ntBASIC17.09■□□□□ 0.33
CASC4Q6P4E1 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASC4Q6P4E1 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CASC4Q6P4E1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
CASC4Q6P4E1 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CASC4Q6P4E1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
CASC4Q6P4E1 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
CASC4Q6P4E1 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.08■□□□□ 0.33
CASC4Q6P4E1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.08■□□□□ 0.33
CASC4Q6P4E1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.08■□□□□ 0.33
CASC4Q6P4E1 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CASC4Q6P4E1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CASC4Q6P4E1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CASC4Q6P4E1 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CASC4Q6P4E1 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CASC4Q6P4E1 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.08■□□□□ 0.32
CASC4Q6P4E1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 AC139887.3-201ENST00000568585 713 ntBASIC17.08■□□□□ 0.32
CASC4Q6P4E1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 MTDHP4-201ENST00000600287 670 ntBASIC17.08■□□□□ 0.32
CASC4Q6P4E1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASC4Q6P4E1 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms