Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 U1.21-201ENST00000580816 167 ntBASIC17.19■□□□□ 0.34
ERCC2P18074 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.19■□□□□ 0.34
ERCC2P18074 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.19■□□□□ 0.34
ERCC2P18074 AC124067.4-201ENST00000519691 2379 ntBASIC17.19■□□□□ 0.34
ERCC2P18074 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC2P18074 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC2P18074 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ERCC2P18074 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
ERCC2P18074 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
ERCC2P18074 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC2P18074 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.19■□□□□ 0.34
ERCC2P18074 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC2P18074 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC2P18074 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.19■□□□□ 0.34
ERCC2P18074 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC2P18074 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ERCC2P18074 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.18■□□□□ 0.34
ERCC2P18074 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC2P18074 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.18■□□□□ 0.34
ERCC2P18074 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
ERCC2P18074 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC2P18074 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC2P18074 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC2P18074 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
ERCC2P18074 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC2P18074 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC2P18074 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC2P18074 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
ERCC2P18074 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC2P18074 GGT3P-204ENST00000453783 1664 ntBASIC17.18■□□□□ 0.34
ERCC2P18074 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
ERCC2P18074 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.18■□□□□ 0.34
ERCC2P18074 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
ERCC2P18074 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.18■□□□□ 0.34
ERCC2P18074 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
ERCC2P18074 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
ERCC2P18074 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ERCC2P18074 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.18■□□□□ 0.34
ERCC2P18074 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.18■□□□□ 0.34
ERCC2P18074 AL031055.1-201ENST00000606362 631 ntBASIC17.18■□□□□ 0.34
ERCC2P18074 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC2P18074 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.18■□□□□ 0.34
ERCC2P18074 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC2P18074 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.18■□□□□ 0.34
ERCC2P18074 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.18■□□□□ 0.34
ERCC2P18074 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC2P18074 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.18■□□□□ 0.34
ERCC2P18074 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC2P18074 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.18■□□□□ 0.34
ERCC2P18074 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.17■□□□□ 0.34
ERCC2P18074 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC2P18074 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC2P18074 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC2P18074 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.17■□□□□ 0.34
ERCC2P18074 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC2P18074 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.17■□□□□ 0.34
ERCC2P18074 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC2P18074 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC2P18074 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC2P18074 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC2P18074 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC2P18074 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC2P18074 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC2P18074 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC2P18074 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC2P18074 MIR574-201ENST00000385209 96 ntBASIC17.17■□□□□ 0.34
ERCC2P18074 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ERCC2P18074 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
ERCC2P18074 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.17■□□□□ 0.34
ERCC2P18074 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.17■□□□□ 0.34
ERCC2P18074 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.17■□□□□ 0.34
ERCC2P18074 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.17■□□□□ 0.34
ERCC2P18074 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.17■□□□□ 0.34
ERCC2P18074 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC2P18074 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.17■□□□□ 0.34
ERCC2P18074 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC2P18074 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.17■□□□□ 0.34
ERCC2P18074 AL513190.1-201ENST00000621254 727 ntBASIC17.17■□□□□ 0.34
ERCC2P18074 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ERCC2P18074 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC2P18074 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.17■□□□□ 0.34
ERCC2P18074 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ERCC2P18074 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC2P18074 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC2P18074 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.17■□□□□ 0.34
ERCC2P18074 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
ERCC2P18074 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC2P18074 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
ERCC2P18074 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.16■□□□□ 0.34
ERCC2P18074 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC2P18074 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC2P18074 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC2P18074 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ERCC2P18074 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC2P18074 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
ERCC2P18074 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ERCC2P18074 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.16■□□□□ 0.34
ERCC2P18074 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.16■□□□□ 0.34
ERCC2P18074 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC2P18074 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms