Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 CROCCP1-201ENST00000426910 5675 ntBASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 FAM185BP-201ENST00000443595 716 ntBASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 AL162727.3-201ENST00000635661 2787 ntBASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 AC116353.5-201ENST00000638148 1699 ntBASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 PAWRP1-201ENST00000451083 565 ntBASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 AC091812.2-201ENST00000619081 385 ntBASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA6Q9Y5G7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PCDHGA6Q9Y5G7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PCDHGA6Q9Y5G7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
PCDHGA6Q9Y5G7 AL603756.1-201ENST00000606511 2163 ntBASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 AC068137.2-201ENST00000605408 478 ntBASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms