Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1Q9Y2A7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 MIR346-201ENST00000362234 95 ntBASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 AC055876.3-201ENST00000431496 288 ntBASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 AC140878.1-201ENST00000565277 250 ntBASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 AC138649.4-201ENST00000612222 287 ntBASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 MIR6080-201ENST00000617359 66 ntBASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 LINC00896-202ENST00000609602 2128 ntBASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKAP1Q9Y2A7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 AC108860.2-201ENST00000562760 2183 ntBASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 CROCCP2-202ENST00000412962 2773 ntBASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 SPDYE14P-201ENST00000442619 822 ntBASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 IGHV3-42-201ENST00000520410 361 ntBASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 AC008677.1-201ENST00000519230 1561 ntBASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCKAP1Q9Y2A7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCKAP1Q9Y2A7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCKAP1Q9Y2A7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.71■□□□□ 0.27
NCKAP1Q9Y2A7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCKAP1Q9Y2A7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCKAP1Q9Y2A7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
NCKAP1Q9Y2A7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms