Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.63□□□□□ -0.07
CPNE2Q96FN4 AL049597.2-201ENST00000565575 961 ntBASIC14.63□□□□□ -0.07
CPNE2Q96FN4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
CPNE2Q96FN4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.63□□□□□ -0.07
CPNE2Q96FN4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.63□□□□□ -0.07
CPNE2Q96FN4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE2Q96FN4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE2Q96FN4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE2Q96FN4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CPNE2Q96FN4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.63□□□□□ -0.07
CPNE2Q96FN4 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE2Q96FN4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE2Q96FN4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.63□□□□□ -0.07
CPNE2Q96FN4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.63□□□□□ -0.07
CPNE2Q96FN4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE2Q96FN4 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE2Q96FN4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.63□□□□□ -0.07
CPNE2Q96FN4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE2Q96FN4 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE2Q96FN4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE2Q96FN4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.63□□□□□ -0.07
CPNE2Q96FN4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE2Q96FN4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.63□□□□□ -0.07
CPNE2Q96FN4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 LINC00265-3P-201ENST00000447588 903 ntBASIC14.62□□□□□ -0.07
CPNE2Q96FN4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 AP005901.3-202ENST00000581653 237 ntBASIC14.62□□□□□ -0.07
CPNE2Q96FN4 AC010331.1-201ENST00000611423 582 ntBASIC14.62□□□□□ -0.07
CPNE2Q96FN4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 AC023824.1-201ENST00000562945 2975 ntBASIC14.62□□□□□ -0.07
CPNE2Q96FN4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CPNE2Q96FN4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 TPSP2-201ENST00000561760 610 ntBASIC14.61□□□□□ -0.07
CPNE2Q96FN4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 BNIP3P18-201ENST00000593976 575 ntBASIC14.61□□□□□ -0.07
CPNE2Q96FN4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 AC092329.2-201ENST00000598402 547 ntBASIC14.61□□□□□ -0.07
CPNE2Q96FN4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 AC116407.4-201ENST00000623319 1061 ntBASIC14.61□□□□□ -0.07
CPNE2Q96FN4 AP000867.4-201ENST00000641616 219 ntBASIC14.61□□□□□ -0.07
CPNE2Q96FN4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE2Q96FN4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms