Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 AL596087.1-201ENST00000400979 1969 ntBASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.11■□□□□ 0.01
BBS1Q8NFJ9 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 SIGLEC16-201ENST00000599858 1437 ntBASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 GGT3P-204ENST00000453783 1664 ntBASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 AC074051.2-201ENST00000565115 352 ntBASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 AC013467.2-201ENST00000605472 835 ntBASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 AL590787.1-201ENST00000568856 1315 ntBASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
BBS1Q8NFJ9 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
BBS1Q8NFJ9 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.09■□□□□ 0.01
BBS1Q8NFJ9 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BBS1Q8NFJ9 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms