Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 AC021097.1-201ENST00000607902 574 ntBASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 AC109635.5-201ENST00000533593 962 ntBASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 AC092919.2-201ENST00000623631 1645 ntBASIC15.54■□□□□ 0.08
PRICKLE4Q2TBC4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 ME2P1-201ENST00000426028 1970 ntBASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 AC040169.1-201ENST00000565382 521 ntBASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 AC068137.2-201ENST00000605408 478 ntBASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRICKLE4Q2TBC4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms