Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPA3P35244 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.97■□□□□ 0.31
RPA3P35244 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.97■□□□□ 0.31
RPA3P35244 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPA3P35244 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPA3P35244 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.97■□□□□ 0.31
RPA3P35244 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.97■□□□□ 0.31
RPA3P35244 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPA3P35244 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPA3P35244 AL513477.1-201ENST00000602865 2407 ntBASIC16.97■□□□□ 0.31
RPA3P35244 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
RPA3P35244 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPA3P35244 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.97■□□□□ 0.31
RPA3P35244 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.97■□□□□ 0.31
RPA3P35244 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.97■□□□□ 0.31
RPA3P35244 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.97■□□□□ 0.31
RPA3P35244 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.97■□□□□ 0.31
RPA3P35244 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.97■□□□□ 0.31
RPA3P35244 AC132008.2-207ENST00000454517 770 ntBASIC16.97■□□□□ 0.31
RPA3P35244 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPA3P35244 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.97■□□□□ 0.31
RPA3P35244 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RPA3P35244 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.97■□□□□ 0.31
RPA3P35244 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPA3P35244 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPA3P35244 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.97■□□□□ 0.31
RPA3P35244 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPA3P35244 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPA3P35244 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPA3P35244 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.97■□□□□ 0.31
RPA3P35244 AC006538.1-201ENST00000567905 1585 ntBASIC16.97■□□□□ 0.31
RPA3P35244 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RPA3P35244 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.97■□□□□ 0.31
RPA3P35244 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPA3P35244 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.97■□□□□ 0.31
RPA3P35244 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPA3P35244 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
RPA3P35244 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPA3P35244 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RPA3P35244 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPA3P35244 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RPA3P35244 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPA3P35244 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
RPA3P35244 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
RPA3P35244 AC132938.5-201ENST00000624980 1813 ntBASIC16.96■□□□□ 0.31
RPA3P35244 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.96■□□□□ 0.31
RPA3P35244 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RPA3P35244 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RPA3P35244 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPA3P35244 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.96■□□□□ 0.31
RPA3P35244 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RPA3P35244 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RPA3P35244 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.96■□□□□ 0.31
RPA3P35244 DUSP5P1-201ENST00000441325 1139 ntBASIC16.96■□□□□ 0.31
RPA3P35244 ABCD1P5-201ENST00000445663 754 ntBASIC16.96■□□□□ 0.31
RPA3P35244 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RPA3P35244 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RPA3P35244 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPA3P35244 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RPA3P35244 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RPA3P35244 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RPA3P35244 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPA3P35244 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.96■□□□□ 0.31
RPA3P35244 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RPA3P35244 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.96■□□□□ 0.31
RPA3P35244 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPA3P35244 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RPA3P35244 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.96■□□□□ 0.3
RPA3P35244 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RPA3P35244 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RPA3P35244 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RPA3P35244 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RPA3P35244 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RPA3P35244 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.95■□□□□ 0.3
RPA3P35244 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RPA3P35244 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPA3P35244 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
RPA3P35244 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RPA3P35244 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RPA3P35244 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPA3P35244 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPA3P35244 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RPA3P35244 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPA3P35244 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.95■□□□□ 0.3
RPA3P35244 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
RPA3P35244 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.95■□□□□ 0.3
RPA3P35244 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RPA3P35244 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPA3P35244 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RPA3P35244 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.95■□□□□ 0.3
RPA3P35244 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RPA3P35244 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.95■□□□□ 0.3
RPA3P35244 DUX4L17-201ENST00000557360 1267 ntBASIC16.95■□□□□ 0.3
RPA3P35244 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.95■□□□□ 0.3
RPA3P35244 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.95■□□□□ 0.3
RPA3P35244 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RPA3P35244 IFNL4P1-201ENST00000607083 540 ntBASIC16.95■□□□□ 0.3
RPA3P35244 AD001527.2-201ENST00000622994 785 ntBASIC16.95■□□□□ 0.3
RPA3P35244 AC073592.5-201ENST00000624854 528 ntBASIC16.95■□□□□ 0.3
RPA3P35244 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms