Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KRT4P19013 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
KRT4P19013 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT4P19013 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.86■□□□□ 0.29
KRT4P19013 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.86■□□□□ 0.29
KRT4P19013 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
KRT4P19013 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.86■□□□□ 0.29
KRT4P19013 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT4P19013 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.85■□□□□ 0.29
KRT4P19013 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT4P19013 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
KRT4P19013 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT4P19013 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT4P19013 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
KRT4P19013 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT4P19013 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KRT4P19013 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT4P19013 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.85■□□□□ 0.29
KRT4P19013 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT4P19013 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT4P19013 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.85■□□□□ 0.29
KRT4P19013 AL020989.1-201ENST00000422979 469 ntBASIC16.85■□□□□ 0.29
KRT4P19013 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT4P19013 VENTXP7-201ENST00000475503 772 ntBASIC16.85■□□□□ 0.29
KRT4P19013 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.85■□□□□ 0.29
KRT4P19013 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.85■□□□□ 0.29
KRT4P19013 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.85■□□□□ 0.29
KRT4P19013 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.85■□□□□ 0.29
KRT4P19013 AP005901.3-202ENST00000581653 237 ntBASIC16.85■□□□□ 0.29
KRT4P19013 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.85■□□□□ 0.29
KRT4P19013 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.85■□□□□ 0.29
KRT4P19013 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.85■□□□□ 0.29
KRT4P19013 AC097637.2-201ENST00000624096 1997 ntBASIC16.85■□□□□ 0.29
KRT4P19013 DBET-201ENST00000630918 3363 ntBASIC16.85■□□□□ 0.29
KRT4P19013 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
KRT4P19013 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT4P19013 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.85■□□□□ 0.29
KRT4P19013 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.85■□□□□ 0.29
KRT4P19013 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KRT4P19013 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.85■□□□□ 0.29
KRT4P19013 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT4P19013 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT4P19013 GGT3P-204ENST00000453783 1664 ntBASIC16.85■□□□□ 0.29
KRT4P19013 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.85■□□□□ 0.29
KRT4P19013 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT4P19013 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT4P19013 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT4P19013 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT4P19013 AC068418.2-201ENST00000577309 3703 ntBASIC16.84■□□□□ 0.29
KRT4P19013 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT4P19013 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT4P19013 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT4P19013 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT4P19013 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT4P19013 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT4P19013 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT4P19013 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT4P19013 AC104640.1-201ENST00000562617 2109 ntBASIC16.84■□□□□ 0.29
KRT4P19013 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
KRT4P19013 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT4P19013 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT4P19013 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT4P19013 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT4P19013 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
KRT4P19013 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT4P19013 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.84■□□□□ 0.29
KRT4P19013 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.84■□□□□ 0.29
KRT4P19013 AC063952.2-201ENST00000498792 1227 ntBASIC16.84■□□□□ 0.29
KRT4P19013 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
KRT4P19013 AC093827.2-201ENST00000512654 315 ntBASIC16.84■□□□□ 0.29
KRT4P19013 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT4P19013 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.84■□□□□ 0.29
KRT4P19013 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT4P19013 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT4P19013 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT4P19013 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT4P19013 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT4P19013 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT4P19013 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT4P19013 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT4P19013 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
KRT4P19013 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT4P19013 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT4P19013 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT4P19013 AC004817.3-201ENST00000602957 2129 ntBASIC16.84■□□□□ 0.29
KRT4P19013 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT4P19013 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT4P19013 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT4P19013 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
KRT4P19013 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.83■□□□□ 0.29
KRT4P19013 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT4P19013 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT4P19013 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT4P19013 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT4P19013 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT4P19013 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT4P19013 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT4P19013 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT4P19013 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT4P19013 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms