Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
OPHN1O60890 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.53■□□□□ 0.4
OPHN1O60890 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.53■□□□□ 0.4
OPHN1O60890 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
OPHN1O60890 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
OPHN1O60890 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
OPHN1O60890 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.53■□□□□ 0.4
OPHN1O60890 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
OPHN1O60890 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
OPHN1O60890 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
OPHN1O60890 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
OPHN1O60890 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.53■□□□□ 0.4
OPHN1O60890 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.53■□□□□ 0.4
OPHN1O60890 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.53■□□□□ 0.4
OPHN1O60890 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.53■□□□□ 0.4
OPHN1O60890 AC064836.3-201ENST00000607928 673 ntBASIC17.53■□□□□ 0.4
OPHN1O60890 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.53■□□□□ 0.4
OPHN1O60890 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
OPHN1O60890 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
OPHN1O60890 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
OPHN1O60890 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.53■□□□□ 0.4
OPHN1O60890 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
OPHN1O60890 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
OPHN1O60890 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
OPHN1O60890 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
OPHN1O60890 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.53■□□□□ 0.4
OPHN1O60890 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
OPHN1O60890 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
OPHN1O60890 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
OPHN1O60890 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
OPHN1O60890 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.52■□□□□ 0.4
OPHN1O60890 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.52■□□□□ 0.4
OPHN1O60890 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.52■□□□□ 0.4
OPHN1O60890 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
OPHN1O60890 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.52■□□□□ 0.4
OPHN1O60890 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
OPHN1O60890 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.52■□□□□ 0.4
OPHN1O60890 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
OPHN1O60890 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
OPHN1O60890 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.52■□□□□ 0.4
OPHN1O60890 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
OPHN1O60890 METTL21AP1-201ENST00000438852 635 ntBASIC17.52■□□□□ 0.4
OPHN1O60890 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
OPHN1O60890 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.52■□□□□ 0.4
OPHN1O60890 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
OPHN1O60890 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.52■□□□□ 0.4
OPHN1O60890 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
OPHN1O60890 SNHG9-202ENST00000564014 471 ntBASIC17.52■□□□□ 0.4
OPHN1O60890 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.52■□□□□ 0.4
OPHN1O60890 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.52■□□□□ 0.4
OPHN1O60890 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
OPHN1O60890 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
OPHN1O60890 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
OPHN1O60890 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.52■□□□□ 0.4
OPHN1O60890 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
OPHN1O60890 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
OPHN1O60890 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
OPHN1O60890 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.52■□□□□ 0.39
OPHN1O60890 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
OPHN1O60890 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
OPHN1O60890 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
OPHN1O60890 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
OPHN1O60890 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.52■□□□□ 0.39
OPHN1O60890 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
OPHN1O60890 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.51■□□□□ 0.39
OPHN1O60890 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
OPHN1O60890 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
OPHN1O60890 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
OPHN1O60890 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
OPHN1O60890 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
OPHN1O60890 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OPHN1O60890 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
OPHN1O60890 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
OPHN1O60890 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
OPHN1O60890 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.51■□□□□ 0.39
OPHN1O60890 PRYP5-201ENST00000451909 266 ntBASIC17.51■□□□□ 0.39
OPHN1O60890 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.51■□□□□ 0.39
OPHN1O60890 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.51■□□□□ 0.39
OPHN1O60890 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
OPHN1O60890 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.51■□□□□ 0.39
OPHN1O60890 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.51■□□□□ 0.39
OPHN1O60890 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.51■□□□□ 0.39
OPHN1O60890 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OPHN1O60890 AC006557.2-201ENST00000592985 1240 ntBASIC17.51■□□□□ 0.39
OPHN1O60890 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.51■□□□□ 0.39
OPHN1O60890 AL022326.1-202ENST00000641533 845 ntBASIC17.51■□□□□ 0.39
OPHN1O60890 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.51■□□□□ 0.39
OPHN1O60890 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OPHN1O60890 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
OPHN1O60890 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
OPHN1O60890 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OPHN1O60890 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
OPHN1O60890 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
OPHN1O60890 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
OPHN1O60890 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
OPHN1O60890 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
OPHN1O60890 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.5■□□□□ 0.39
OPHN1O60890 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
OPHN1O60890 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OPHN1O60890 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms