Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMAD6O43541 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SMAD6O43541 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.87■□□□□ 0.29
SMAD6O43541 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.87■□□□□ 0.29
SMAD6O43541 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMAD6O43541 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMAD6O43541 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMAD6O43541 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.87■□□□□ 0.29
SMAD6O43541 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.87■□□□□ 0.29
SMAD6O43541 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMAD6O43541 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SMAD6O43541 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
SMAD6O43541 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMAD6O43541 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.87■□□□□ 0.29
SMAD6O43541 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMAD6O43541 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.87■□□□□ 0.29
SMAD6O43541 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMAD6O43541 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SMAD6O43541 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMAD6O43541 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SMAD6O43541 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMAD6O43541 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMAD6O43541 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMAD6O43541 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMAD6O43541 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.86■□□□□ 0.29
SMAD6O43541 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.86■□□□□ 0.29
SMAD6O43541 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.86■□□□□ 0.29
SMAD6O43541 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMAD6O43541 AC023141.5-201ENST00000458585 616 ntBASIC16.86■□□□□ 0.29
SMAD6O43541 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.86■□□□□ 0.29
SMAD6O43541 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.86■□□□□ 0.29
SMAD6O43541 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.86■□□□□ 0.29
SMAD6O43541 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.86■□□□□ 0.29
SMAD6O43541 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.86■□□□□ 0.29
SMAD6O43541 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMAD6O43541 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.86■□□□□ 0.29
SMAD6O43541 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMAD6O43541 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMAD6O43541 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMAD6O43541 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMAD6O43541 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMAD6O43541 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMAD6O43541 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMAD6O43541 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
SMAD6O43541 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMAD6O43541 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMAD6O43541 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMAD6O43541 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMAD6O43541 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SMAD6O43541 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD6O43541 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
SMAD6O43541 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD6O43541 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD6O43541 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.85■□□□□ 0.29
SMAD6O43541 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD6O43541 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD6O43541 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD6O43541 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD6O43541 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD6O43541 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD6O43541 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD6O43541 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD6O43541 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.85■□□□□ 0.29
SMAD6O43541 TSEN15P1-201ENST00000423257 515 ntBASIC16.85■□□□□ 0.29
SMAD6O43541 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD6O43541 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD6O43541 AC027307.2-201ENST00000591252 911 ntBASIC16.85■□□□□ 0.29
SMAD6O43541 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SMAD6O43541 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD6O43541 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD6O43541 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SMAD6O43541 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.85■□□□□ 0.29
SMAD6O43541 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD6O43541 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.85■□□□□ 0.29
SMAD6O43541 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD6O43541 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD6O43541 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.85■□□□□ 0.29
SMAD6O43541 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SMAD6O43541 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.85■□□□□ 0.29
SMAD6O43541 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SMAD6O43541 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.85■□□□□ 0.29
SMAD6O43541 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.85■□□□□ 0.29
SMAD6O43541 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD6O43541 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD6O43541 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD6O43541 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD6O43541 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD6O43541 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD6O43541 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
SMAD6O43541 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.84■□□□□ 0.29
SMAD6O43541 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
SMAD6O43541 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD6O43541 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.84■□□□□ 0.29
SMAD6O43541 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD6O43541 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD6O43541 AL031731.1-201ENST00000642131 2094 ntBASIC16.84■□□□□ 0.29
SMAD6O43541 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.84■□□□□ 0.29
SMAD6O43541 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD6O43541 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD6O43541 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms