Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.94■□□□□ 0.3
AP3B1O00203 SNX33P1-201ENST00000592116 1762 ntBASIC16.94■□□□□ 0.3
AP3B1O00203 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP3B1O00203 DOC2GP-204ENST00000639052 2548 ntBASIC16.94■□□□□ 0.3
AP3B1O00203 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.94■□□□□ 0.3
AP3B1O00203 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
AP3B1O00203 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
AP3B1O00203 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
AP3B1O00203 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP3B1O00203 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP3B1O00203 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP3B1O00203 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AP3B1O00203 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.93■□□□□ 0.3
AP3B1O00203 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP3B1O00203 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP3B1O00203 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AP3B1O00203 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AP3B1O00203 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AP3B1O00203 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP3B1O00203 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.93■□□□□ 0.3
AP3B1O00203 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AP3B1O00203 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.93■□□□□ 0.3
AP3B1O00203 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP3B1O00203 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AP3B1O00203 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP3B1O00203 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP3B1O00203 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.93■□□□□ 0.3
AP3B1O00203 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.93■□□□□ 0.3
AP3B1O00203 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.93■□□□□ 0.3
AP3B1O00203 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.93■□□□□ 0.3
AP3B1O00203 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.93■□□□□ 0.3
AP3B1O00203 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.93■□□□□ 0.3
AP3B1O00203 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.93■□□□□ 0.3
AP3B1O00203 AL121912.1-201ENST00000603683 238 ntBASIC16.93■□□□□ 0.3
AP3B1O00203 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.93■□□□□ 0.3
AP3B1O00203 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.93■□□□□ 0.3
AP3B1O00203 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
AP3B1O00203 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
AP3B1O00203 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP3B1O00203 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
AP3B1O00203 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP3B1O00203 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP3B1O00203 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.93■□□□□ 0.3
AP3B1O00203 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AP3B1O00203 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP3B1O00203 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AP3B1O00203 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP3B1O00203 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.92■□□□□ 0.3
AP3B1O00203 AL513523.2-202ENST00000427283 2040 ntBASIC16.92■□□□□ 0.3
AP3B1O00203 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.92■□□□□ 0.3
AP3B1O00203 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.92■□□□□ 0.3
AP3B1O00203 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP3B1O00203 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP3B1O00203 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
AP3B1O00203 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP3B1O00203 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
AP3B1O00203 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP3B1O00203 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AP3B1O00203 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
AP3B1O00203 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AP3B1O00203 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP3B1O00203 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP3B1O00203 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP3B1O00203 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.92■□□□□ 0.3
AP3B1O00203 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP3B1O00203 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP3B1O00203 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AP3B1O00203 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AP3B1O00203 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.92■□□□□ 0.3
AP3B1O00203 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.92■□□□□ 0.3
AP3B1O00203 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.92■□□□□ 0.3
AP3B1O00203 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
AP3B1O00203 AC107918.2-201ENST00000530817 355 ntBASIC16.92■□□□□ 0.3
AP3B1O00203 AL356488.2-201ENST00000602755 427 ntBASIC16.92■□□□□ 0.3
AP3B1O00203 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.92■□□□□ 0.3
AP3B1O00203 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.92■□□□□ 0.3
AP3B1O00203 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP3B1O00203 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP3B1O00203 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.92■□□□□ 0.3
AP3B1O00203 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP3B1O00203 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
AP3B1O00203 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AP3B1O00203 AL512652.2-201ENST00000625156 1716 ntBASIC16.92■□□□□ 0.3
AP3B1O00203 LINC01144-201ENST00000626198 1710 ntBASIC16.92■□□□□ 0.3
AP3B1O00203 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AP3B1O00203 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.92■□□□□ 0.3
AP3B1O00203 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AP3B1O00203 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
AP3B1O00203 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
AP3B1O00203 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AP3B1O00203 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP3B1O00203 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
AP3B1O00203 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP3B1O00203 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP3B1O00203 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP3B1O00203 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AP3B1O00203 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP3B1O00203 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
AP3B1O00203 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP3B1O00203 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms