Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00959A0A1B0GUT2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00959A0A1B0GUT2 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
LINC00959A0A1B0GUT2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00959A0A1B0GUT2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00959A0A1B0GUT2 AC022188.1-201ENST00000620960 1664 ntBASIC11.46□□□□□ -0.58
LINC00959A0A1B0GUT2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC11.46□□□□□ -0.58
LINC00959A0A1B0GUT2 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00959A0A1B0GUT2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 BX005266.1-201ENST00000473402 457 ntBASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 ARL16-209ENST00000573715 763 ntTSL 3 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 ARL16-211ENST00000576135 694 ntTSL 3 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 NPAP1P7-201ENST00000613027 823 ntBASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 AC008894.3-201ENST00000624324 3103 ntBASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 MTHFR-217ENST00000641820 1569 ntBASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00959A0A1B0GUT2 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 TOP3BP1-201ENST00000420768 1380 ntBASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 AC132008.2-207ENST00000454517 770 ntBASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 FICD-205ENST00000552758 603 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC00959A0A1B0GUT2 PNN-202ENST00000553331 656 ntTSL 3 BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms