Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 AL031731.1-201ENST00000642131 2094 ntBASIC17.05■□□□□ 0.32
PHACTR1Q9C0D0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 AC005052.1-201ENST00000625181 2492 ntBASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 AC104819.1-201ENST00000504587 486 ntBASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 AC074051.2-201ENST00000565115 352 ntBASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PHACTR1Q9C0D0 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 NFIC-211ENST00000641145 8399 ntBASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 MIR5100-201ENST00000579544 119 ntBASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 MIR3180-1-201ENST00000580374 94 ntBASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 MIR3180-3-201ENST00000584616 94 ntBASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 AL139424.1-201ENST00000607572 797 ntBASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 AL671710.1-201ENST00000610245 2349 ntBASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 AP005117.1-201ENST00000584346 1413 ntBASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHACTR1Q9C0D0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PHACTR1Q9C0D0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.02■□□□□ 0.32
PHACTR1Q9C0D0 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.02■□□□□ 0.32
PHACTR1Q9C0D0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHACTR1Q9C0D0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.02■□□□□ 0.32
PHACTR1Q9C0D0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHACTR1Q9C0D0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.02■□□□□ 0.32
PHACTR1Q9C0D0 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.02■□□□□ 0.32
PHACTR1Q9C0D0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PHACTR1Q9C0D0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PHACTR1Q9C0D0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms