Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
VGLL1Q99990 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VGLL1Q99990 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
VGLL1Q99990 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VGLL1Q99990 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VGLL1Q99990 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.77□□□□□ -0.36
VGLL1Q99990 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.77□□□□□ -0.36
VGLL1Q99990 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
VGLL1Q99990 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
VGLL1Q99990 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
VGLL1Q99990 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VGLL1Q99990 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC12.77□□□□□ -0.36
VGLL1Q99990 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VGLL1Q99990 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VGLL1Q99990 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
VGLL1Q99990 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VGLL1Q99990 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC12.77□□□□□ -0.37
VGLL1Q99990 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
VGLL1Q99990 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VGLL1Q99990 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VGLL1Q99990 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
VGLL1Q99990 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VGLL1Q99990 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
VGLL1Q99990 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
VGLL1Q99990 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VGLL1Q99990 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VGLL1Q99990 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC12.77□□□□□ -0.37
VGLL1Q99990 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC12.77□□□□□ -0.37
VGLL1Q99990 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC12.77□□□□□ -0.37
VGLL1Q99990 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
VGLL1Q99990 NUS1P1-201ENST00000446295 882 ntBASIC12.77□□□□□ -0.37
VGLL1Q99990 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC12.77□□□□□ -0.37
VGLL1Q99990 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC12.77□□□□□ -0.37
VGLL1Q99990 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC12.77□□□□□ -0.37
VGLL1Q99990 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
VGLL1Q99990 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.77□□□□□ -0.37
VGLL1Q99990 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VGLL1Q99990 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC12.77□□□□□ -0.37
VGLL1Q99990 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VGLL1Q99990 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VGLL1Q99990 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VGLL1Q99990 AC016734.2-201ENST00000624325 1377 ntBASIC12.77□□□□□ -0.37
VGLL1Q99990 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
VGLL1Q99990 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VGLL1Q99990 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
VGLL1Q99990 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
VGLL1Q99990 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VGLL1Q99990 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC12.77□□□□□ -0.37
VGLL1Q99990 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.77□□□□□ -0.37
VGLL1Q99990 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
VGLL1Q99990 AC023824.1-201ENST00000562945 2975 ntBASIC12.77□□□□□ -0.37
VGLL1Q99990 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VGLL1Q99990 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VGLL1Q99990 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
VGLL1Q99990 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC12.77□□□□□ -0.37
VGLL1Q99990 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VGLL1Q99990 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
VGLL1Q99990 PMPCAP1-201ENST00000508114 1576 ntBASIC12.77□□□□□ -0.37
VGLL1Q99990 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VGLL1Q99990 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
VGLL1Q99990 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VGLL1Q99990 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
VGLL1Q99990 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
VGLL1Q99990 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VGLL1Q99990 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VGLL1Q99990 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VGLL1Q99990 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
VGLL1Q99990 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
VGLL1Q99990 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
VGLL1Q99990 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
VGLL1Q99990 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.76□□□□□ -0.37
VGLL1Q99990 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VGLL1Q99990 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VGLL1Q99990 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
VGLL1Q99990 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
VGLL1Q99990 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC12.76□□□□□ -0.37
VGLL1Q99990 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
VGLL1Q99990 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VGLL1Q99990 AC068587.6-202ENST00000641839 5619 ntBASIC12.76□□□□□ -0.37
VGLL1Q99990 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
VGLL1Q99990 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VGLL1Q99990 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VGLL1Q99990 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.76□□□□□ -0.37
VGLL1Q99990 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VGLL1Q99990 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
VGLL1Q99990 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
VGLL1Q99990 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VGLL1Q99990 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC12.76□□□□□ -0.37
VGLL1Q99990 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VGLL1Q99990 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
VGLL1Q99990 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC12.76□□□□□ -0.37
VGLL1Q99990 SIGLEC30P-201ENST00000455569 941 ntBASIC12.76□□□□□ -0.37
VGLL1Q99990 MINOS1P3-201ENST00000457048 203 ntBASIC12.76□□□□□ -0.37
VGLL1Q99990 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC12.76□□□□□ -0.37
VGLL1Q99990 AC096582.2-201ENST00000510860 516 ntBASIC12.76□□□□□ -0.37
VGLL1Q99990 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms