Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
S1PR3Q99500 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.88□□□□□ -0.19
S1PR3Q99500 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
S1PR3Q99500 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.88□□□□□ -0.19
S1PR3Q99500 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
S1PR3Q99500 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
S1PR3Q99500 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
S1PR3Q99500 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.88□□□□□ -0.19
S1PR3Q99500 AP002414.1-201ENST00000391405 1147 ntBASIC13.88□□□□□ -0.19
S1PR3Q99500 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
S1PR3Q99500 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.88□□□□□ -0.19
S1PR3Q99500 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
S1PR3Q99500 FGFR3P6-201ENST00000457012 610 ntBASIC13.88□□□□□ -0.19
S1PR3Q99500 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.88□□□□□ -0.19
S1PR3Q99500 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
S1PR3Q99500 RN7SL510P-201ENST00000581311 263 ntBASIC13.88□□□□□ -0.19
S1PR3Q99500 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.88□□□□□ -0.19
S1PR3Q99500 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
S1PR3Q99500 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.88□□□□□ -0.19
S1PR3Q99500 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
S1PR3Q99500 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
S1PR3Q99500 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
S1PR3Q99500 MIR600HG-201ENST00000449175 5984 ntBASIC13.88□□□□□ -0.19
S1PR3Q99500 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
S1PR3Q99500 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
S1PR3Q99500 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
S1PR3Q99500 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
S1PR3Q99500 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
S1PR3Q99500 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
S1PR3Q99500 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
S1PR3Q99500 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
S1PR3Q99500 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
S1PR3Q99500 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
S1PR3Q99500 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
S1PR3Q99500 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.88□□□□□ -0.19
S1PR3Q99500 AL590787.1-201ENST00000568856 1315 ntBASIC13.88□□□□□ -0.19
S1PR3Q99500 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.88□□□□□ -0.19
S1PR3Q99500 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
S1PR3Q99500 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
S1PR3Q99500 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
S1PR3Q99500 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
S1PR3Q99500 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC13.87□□□□□ -0.19
S1PR3Q99500 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
S1PR3Q99500 AC243591.1-201ENST00000452967 1364 ntBASIC13.87□□□□□ -0.19
S1PR3Q99500 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.87□□□□□ -0.19
S1PR3Q99500 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
S1PR3Q99500 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
S1PR3Q99500 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
S1PR3Q99500 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
S1PR3Q99500 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
S1PR3Q99500 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
S1PR3Q99500 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.87□□□□□ -0.19
S1PR3Q99500 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
S1PR3Q99500 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.87□□□□□ -0.19
S1PR3Q99500 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.87□□□□□ -0.19
S1PR3Q99500 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.87□□□□□ -0.19
S1PR3Q99500 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.87□□□□□ -0.19
S1PR3Q99500 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
S1PR3Q99500 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.87□□□□□ -0.19
S1PR3Q99500 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.87□□□□□ -0.19
S1PR3Q99500 AC064862.7-201ENST00000604520 867 ntBASIC13.87□□□□□ -0.19
S1PR3Q99500 AL139424.1-201ENST00000607572 797 ntBASIC13.87□□□□□ -0.19
S1PR3Q99500 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.87□□□□□ -0.19
S1PR3Q99500 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
S1PR3Q99500 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
S1PR3Q99500 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
S1PR3Q99500 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
S1PR3Q99500 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.87□□□□□ -0.19
S1PR3Q99500 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
S1PR3Q99500 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.87□□□□□ -0.19
S1PR3Q99500 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
S1PR3Q99500 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.87□□□□□ -0.19
S1PR3Q99500 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
S1PR3Q99500 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
S1PR3Q99500 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.87□□□□□ -0.19
S1PR3Q99500 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
S1PR3Q99500 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
S1PR3Q99500 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
S1PR3Q99500 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.86□□□□□ -0.19
S1PR3Q99500 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
S1PR3Q99500 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
S1PR3Q99500 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
S1PR3Q99500 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.86□□□□□ -0.19
S1PR3Q99500 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
S1PR3Q99500 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
S1PR3Q99500 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.86□□□□□ -0.19
S1PR3Q99500 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.86□□□□□ -0.19
S1PR3Q99500 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
S1PR3Q99500 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
S1PR3Q99500 AC092171.3-201ENST00000610122 2651 ntBASIC13.86□□□□□ -0.19
S1PR3Q99500 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
S1PR3Q99500 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
S1PR3Q99500 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
S1PR3Q99500 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
S1PR3Q99500 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
S1PR3Q99500 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.86□□□□□ -0.19
S1PR3Q99500 FAAHP1-202ENST00000446499 1238 ntBASIC13.86□□□□□ -0.19
S1PR3Q99500 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
S1PR3Q99500 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.86□□□□□ -0.19
S1PR3Q99500 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms