Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB40CQ96S21 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40CQ96S21 AC073508.3-201ENST00000619697 1419 ntBASIC13.65□□□□□ -0.22
RAB40CQ96S21 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB40CQ96S21 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40CQ96S21 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40CQ96S21 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40CQ96S21 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40CQ96S21 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40CQ96S21 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40CQ96S21 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.65□□□□□ -0.22
RAB40CQ96S21 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.65□□□□□ -0.22
RAB40CQ96S21 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40CQ96S21 SPDYE15P-201ENST00000424157 909 ntBASIC13.65□□□□□ -0.22
RAB40CQ96S21 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.65□□□□□ -0.22
RAB40CQ96S21 AL359075.1-203ENST00000462729 1002 ntBASIC13.65□□□□□ -0.22
RAB40CQ96S21 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
RAB40CQ96S21 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB40CQ96S21 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.65□□□□□ -0.22
RAB40CQ96S21 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.65□□□□□ -0.22
RAB40CQ96S21 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB40CQ96S21 AC139887.4-201ENST00000607877 719 ntBASIC13.65□□□□□ -0.22
RAB40CQ96S21 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40CQ96S21 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40CQ96S21 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB40CQ96S21 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RAB40CQ96S21 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40CQ96S21 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40CQ96S21 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40CQ96S21 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40CQ96S21 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RAB40CQ96S21 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40CQ96S21 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40CQ96S21 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40CQ96S21 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.65□□□□□ -0.23
RAB40CQ96S21 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 AL603832.2-201ENST00000566195 2125 ntBASIC13.64□□□□□ -0.23
RAB40CQ96S21 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 BAALC-202ENST00000306391 243 ntTSL 5 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 BAALC-204ENST00000330955 222 ntTSL 5 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 KLF4P1-201ENST00000412782 1185 ntBASIC13.64□□□□□ -0.23
RAB40CQ96S21 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 KRT18P57-201ENST00000443599 1254 ntBASIC13.64□□□□□ -0.23
RAB40CQ96S21 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 AC011558.1-201ENST00000623459 338 ntBASIC13.64□□□□□ -0.23
RAB40CQ96S21 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 AC068418.2-201ENST00000577309 3703 ntBASIC13.64□□□□□ -0.23
RAB40CQ96S21 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms