Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.53■□□□□ 0.24
RDH11Q8TC12 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RDH11Q8TC12 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RDH11Q8TC12 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.53■□□□□ 0.24
RDH11Q8TC12 GGT4P-201ENST00000623672 1708 ntBASIC16.53■□□□□ 0.24
RDH11Q8TC12 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RDH11Q8TC12 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RDH11Q8TC12 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RDH11Q8TC12 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RDH11Q8TC12 AP005117.1-201ENST00000584346 1413 ntBASIC16.53■□□□□ 0.24
RDH11Q8TC12 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RDH11Q8TC12 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RDH11Q8TC12 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RDH11Q8TC12 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RDH11Q8TC12 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RDH11Q8TC12 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RDH11Q8TC12 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.52■□□□□ 0.24
RDH11Q8TC12 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.52■□□□□ 0.24
RDH11Q8TC12 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RDH11Q8TC12 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RDH11Q8TC12 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
RDH11Q8TC12 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RDH11Q8TC12 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RDH11Q8TC12 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RDH11Q8TC12 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
RDH11Q8TC12 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RDH11Q8TC12 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.52■□□□□ 0.24
RDH11Q8TC12 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.52■□□□□ 0.24
RDH11Q8TC12 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.52■□□□□ 0.24
RDH11Q8TC12 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.52■□□□□ 0.24
RDH11Q8TC12 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.52■□□□□ 0.24
RDH11Q8TC12 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.52■□□□□ 0.24
RDH11Q8TC12 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RDH11Q8TC12 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RDH11Q8TC12 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.52■□□□□ 0.24
RDH11Q8TC12 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RDH11Q8TC12 MIR3180-1-201ENST00000580374 94 ntBASIC16.52■□□□□ 0.24
RDH11Q8TC12 MIR4492-201ENST00000581627 80 ntBASIC16.52■□□□□ 0.24
RDH11Q8TC12 MIR3180-3-201ENST00000584616 94 ntBASIC16.52■□□□□ 0.24
RDH11Q8TC12 AC092119.3-201ENST00000612618 583 ntBASIC16.52■□□□□ 0.24
RDH11Q8TC12 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
RDH11Q8TC12 AL512652.2-201ENST00000625156 1716 ntBASIC16.52■□□□□ 0.24
RDH11Q8TC12 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RDH11Q8TC12 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RDH11Q8TC12 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
RDH11Q8TC12 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RDH11Q8TC12 KRT8P39-201ENST00000396270 1433 ntBASIC16.52■□□□□ 0.23
RDH11Q8TC12 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RDH11Q8TC12 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RDH11Q8TC12 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RDH11Q8TC12 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.51■□□□□ 0.23
RDH11Q8TC12 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RDH11Q8TC12 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RDH11Q8TC12 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.51■□□□□ 0.23
RDH11Q8TC12 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RDH11Q8TC12 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RDH11Q8TC12 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.51■□□□□ 0.23
RDH11Q8TC12 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RDH11Q8TC12 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RDH11Q8TC12 AL671710.1-201ENST00000610245 2349 ntBASIC16.51■□□□□ 0.23
RDH11Q8TC12 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RDH11Q8TC12 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RDH11Q8TC12 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RDH11Q8TC12 AC006449.6-201ENST00000612330 2296 ntBASIC16.51■□□□□ 0.23
RDH11Q8TC12 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.51■□□□□ 0.23
RDH11Q8TC12 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
RDH11Q8TC12 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RDH11Q8TC12 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
RDH11Q8TC12 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RDH11Q8TC12 PAWRP1-201ENST00000451083 565 ntBASIC16.51■□□□□ 0.23
RDH11Q8TC12 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
RDH11Q8TC12 AP000867.3-201ENST00000524675 377 ntBASIC16.51■□□□□ 0.23
RDH11Q8TC12 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RDH11Q8TC12 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
RDH11Q8TC12 MPDU1-223ENST00000582151 728 ntBASIC16.51■□□□□ 0.23
RDH11Q8TC12 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.51■□□□□ 0.23
RDH11Q8TC12 AC099336.1-202ENST00000602961 463 ntBASIC16.51■□□□□ 0.23
RDH11Q8TC12 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
RDH11Q8TC12 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
RDH11Q8TC12 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.51■□□□□ 0.23
RDH11Q8TC12 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RDH11Q8TC12 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RDH11Q8TC12 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RDH11Q8TC12 AL022326.1-202ENST00000641533 845 ntBASIC16.51■□□□□ 0.23
RDH11Q8TC12 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RDH11Q8TC12 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RDH11Q8TC12 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.51■□□□□ 0.23
RDH11Q8TC12 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RDH11Q8TC12 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RDH11Q8TC12 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RDH11Q8TC12 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RDH11Q8TC12 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RDH11Q8TC12 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RDH11Q8TC12 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RDH11Q8TC12 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RDH11Q8TC12 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.51■□□□□ 0.23
RDH11Q8TC12 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RDH11Q8TC12 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RDH11Q8TC12 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RDH11Q8TC12 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms