Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.72□□□□□ -0.21
SPCS3P61009 AC083849.1-201ENST00000615227 514 ntBASIC13.72□□□□□ -0.21
SPCS3P61009 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
SPCS3P61009 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SPCS3P61009 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SPCS3P61009 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
SPCS3P61009 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
SPCS3P61009 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.72□□□□□ -0.21
SPCS3P61009 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SPCS3P61009 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
SPCS3P61009 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPCS3P61009 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.72□□□□□ -0.21
SPCS3P61009 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.72□□□□□ -0.21
SPCS3P61009 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPCS3P61009 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SPCS3P61009 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SPCS3P61009 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.72□□□□□ -0.21
SPCS3P61009 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPCS3P61009 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.72□□□□□ -0.21
SPCS3P61009 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPCS3P61009 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPCS3P61009 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
SPCS3P61009 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SPCS3P61009 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SPCS3P61009 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.71□□□□□ -0.21
SPCS3P61009 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.71□□□□□ -0.21
SPCS3P61009 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
SPCS3P61009 AC132938.5-201ENST00000624980 1813 ntBASIC13.71□□□□□ -0.21
SPCS3P61009 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SPCS3P61009 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SPCS3P61009 AL137784.3-201ENST00000623858 2288 ntBASIC13.71□□□□□ -0.21
SPCS3P61009 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SPCS3P61009 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SPCS3P61009 AC079328.2-201ENST00000561241 3354 ntBASIC13.71□□□□□ -0.21
SPCS3P61009 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
SPCS3P61009 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SPCS3P61009 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.71□□□□□ -0.21
SPCS3P61009 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SPCS3P61009 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
SPCS3P61009 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SPCS3P61009 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SPCS3P61009 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SPCS3P61009 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SPCS3P61009 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SPCS3P61009 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.71□□□□□ -0.21
SPCS3P61009 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.71□□□□□ -0.21
SPCS3P61009 AL845331.1-201ENST00000424978 1190 ntBASIC13.71□□□□□ -0.21
SPCS3P61009 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
SPCS3P61009 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.71□□□□□ -0.21
SPCS3P61009 AC006011.2-201ENST00000621313 1158 ntBASIC13.71□□□□□ -0.21
SPCS3P61009 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.71□□□□□ -0.21
SPCS3P61009 AD001527.2-201ENST00000622994 785 ntBASIC13.71□□□□□ -0.21
SPCS3P61009 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SPCS3P61009 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SPCS3P61009 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SPCS3P61009 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13.71□□□□□ -0.21
SPCS3P61009 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SPCS3P61009 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.71□□□□□ -0.21
SPCS3P61009 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SPCS3P61009 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SPCS3P61009 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.71□□□□□ -0.21
SPCS3P61009 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
SPCS3P61009 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SPCS3P61009 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
SPCS3P61009 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SPCS3P61009 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SPCS3P61009 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SPCS3P61009 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
SPCS3P61009 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
SPCS3P61009 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
SPCS3P61009 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SPCS3P61009 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.22
SPCS3P61009 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
SPCS3P61009 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SPCS3P61009 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SPCS3P61009 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SPCS3P61009 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.7□□□□□ -0.22
SPCS3P61009 AL645728.1-201ENST00000366221 2101 ntBASIC13.7□□□□□ -0.22
SPCS3P61009 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS3P61009 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS3P61009 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS3P61009 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS3P61009 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS3P61009 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.7□□□□□ -0.22
SPCS3P61009 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS3P61009 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SPCS3P61009 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SPCS3P61009 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS3P61009 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
SPCS3P61009 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS3P61009 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS3P61009 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS3P61009 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS3P61009 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS3P61009 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.7□□□□□ -0.22
SPCS3P61009 KRT18P57-201ENST00000443599 1254 ntBASIC13.7□□□□□ -0.22
SPCS3P61009 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS3P61009 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.7□□□□□ -0.22
SPCS3P61009 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
SPCS3P61009 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms