Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCLP18206 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VCLP18206 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VCLP18206 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VCLP18206 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCLP18206 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCLP18206 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCLP18206 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
VCLP18206 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.93■□□□□ 0.3
VCLP18206 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
VCLP18206 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VCLP18206 AC060834.1-201ENST00000443027 2032 ntBASIC16.92■□□□□ 0.3
VCLP18206 AC026691.1-201ENST00000602502 2017 ntBASIC16.92■□□□□ 0.3
VCLP18206 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
VCLP18206 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCLP18206 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.92■□□□□ 0.3
VCLP18206 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCLP18206 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCLP18206 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VCLP18206 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCLP18206 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.92■□□□□ 0.3
VCLP18206 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VCLP18206 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCLP18206 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCLP18206 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCLP18206 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.92■□□□□ 0.3
VCLP18206 AP002414.1-201ENST00000391405 1147 ntBASIC16.92■□□□□ 0.3
VCLP18206 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.92■□□□□ 0.3
VCLP18206 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCLP18206 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.92■□□□□ 0.3
VCLP18206 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
VCLP18206 Z83851.2-201ENST00000609564 659 ntBASIC16.92■□□□□ 0.3
VCLP18206 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCLP18206 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
VCLP18206 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VCLP18206 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VCLP18206 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCLP18206 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCLP18206 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.92■□□□□ 0.3
VCLP18206 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.92■□□□□ 0.3
VCLP18206 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.92■□□□□ 0.3
VCLP18206 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCLP18206 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.92■□□□□ 0.3
VCLP18206 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.92■□□□□ 0.3
VCLP18206 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VCLP18206 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCLP18206 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCLP18206 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VCLP18206 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.91■□□□□ 0.3
VCLP18206 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCLP18206 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
VCLP18206 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.91■□□□□ 0.3
VCLP18206 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
VCLP18206 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VCLP18206 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCLP18206 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCLP18206 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VCLP18206 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VCLP18206 EGFEM1P-202ENST00000431685 1563 ntBASIC16.91■□□□□ 0.3
VCLP18206 HYMAI-201ENST00000635591 3347 ntBASIC16.91■□□□□ 0.3
VCLP18206 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCLP18206 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCLP18206 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.91■□□□□ 0.3
VCLP18206 RNA5SP415-201ENST00000517246 115 ntBASIC16.91■□□□□ 0.3
VCLP18206 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.91■□□□□ 0.3
VCLP18206 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.91■□□□□ 0.3
VCLP18206 AC145285.3-201ENST00000564603 959 ntBASIC16.91■□□□□ 0.3
VCLP18206 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCLP18206 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCLP18206 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VCLP18206 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
VCLP18206 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
VCLP18206 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
VCLP18206 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.91■□□□□ 0.3
VCLP18206 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.91■□□□□ 0.3
VCLP18206 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCLP18206 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.91■□□□□ 0.3
VCLP18206 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VCLP18206 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
VCLP18206 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
VCLP18206 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VCLP18206 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VCLP18206 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCLP18206 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCLP18206 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.9■□□□□ 0.3
VCLP18206 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.9■□□□□ 0.3
VCLP18206 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
VCLP18206 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCLP18206 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCLP18206 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCLP18206 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCLP18206 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.9■□□□□ 0.3
VCLP18206 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.9■□□□□ 0.3
VCLP18206 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCLP18206 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.9■□□□□ 0.3
VCLP18206 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCLP18206 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.9■□□□□ 0.3
VCLP18206 AC104109.2-201ENST00000602919 1418 ntBASIC16.9■□□□□ 0.3
VCLP18206 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCLP18206 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms