Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAPDHP04406 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GAPDHP04406 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAPDHP04406 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
GAPDHP04406 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.1□□□□□ -0.15
GAPDHP04406 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.1□□□□□ -0.15
GAPDHP04406 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAPDHP04406 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAPDHP04406 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAPDHP04406 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.1□□□□□ -0.15
GAPDHP04406 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.1□□□□□ -0.15
GAPDHP04406 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.1□□□□□ -0.15
GAPDHP04406 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.1□□□□□ -0.15
GAPDHP04406 AC124947.2-201ENST00000547118 1133 ntBASIC14.1□□□□□ -0.15
GAPDHP04406 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
GAPDHP04406 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAPDHP04406 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.1□□□□□ -0.15
GAPDHP04406 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.1□□□□□ -0.15
GAPDHP04406 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAPDHP04406 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GAPDHP04406 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GAPDHP04406 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.1□□□□□ -0.15
GAPDHP04406 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.1□□□□□ -0.15
GAPDHP04406 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAPDHP04406 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.1□□□□□ -0.15
GAPDHP04406 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.1□□□□□ -0.15
GAPDHP04406 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
GAPDHP04406 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAPDHP04406 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAPDHP04406 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.1□□□□□ -0.15
GAPDHP04406 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
GAPDHP04406 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAPDHP04406 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
GAPDHP04406 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.09□□□□□ -0.15
GAPDHP04406 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.09□□□□□ -0.15
GAPDHP04406 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GAPDHP04406 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GAPDHP04406 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GAPDHP04406 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.09□□□□□ -0.15
GAPDHP04406 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GAPDHP04406 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GAPDHP04406 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GAPDHP04406 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
GAPDHP04406 AC126177.1-201ENST00000547829 2218 ntBASIC14.09□□□□□ -0.15
GAPDHP04406 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GAPDHP04406 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.09□□□□□ -0.15
GAPDHP04406 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.09□□□□□ -0.15
GAPDHP04406 RBM17P3-201ENST00000417687 1192 ntBASIC14.09□□□□□ -0.15
GAPDHP04406 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.09□□□□□ -0.15
GAPDHP04406 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.09□□□□□ -0.15
GAPDHP04406 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.09□□□□□ -0.15
GAPDHP04406 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
GAPDHP04406 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GAPDHP04406 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GAPDHP04406 CLEC4GP1-201ENST00000596555 870 ntBASIC14.09□□□□□ -0.15
GAPDHP04406 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GAPDHP04406 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.09□□□□□ -0.15
GAPDHP04406 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.09□□□□□ -0.15
GAPDHP04406 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GAPDHP04406 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.09□□□□□ -0.15
GAPDHP04406 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GAPDHP04406 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GAPDHP04406 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GAPDHP04406 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GAPDHP04406 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GAPDHP04406 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.09□□□□□ -0.15
GAPDHP04406 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GAPDHP04406 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GAPDHP04406 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
GAPDHP04406 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.09□□□□□ -0.15
GAPDHP04406 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
GAPDHP04406 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
GAPDHP04406 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
GAPDHP04406 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
GAPDHP04406 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
GAPDHP04406 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
GAPDHP04406 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.08□□□□□ -0.15
GAPDHP04406 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
GAPDHP04406 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
GAPDHP04406 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GAPDHP04406 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
GAPDHP04406 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GAPDHP04406 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
GAPDHP04406 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GAPDHP04406 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GAPDHP04406 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GAPDHP04406 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
GAPDHP04406 AC093525.9-201ENST00000624961 1746 ntBASIC14.08□□□□□ -0.16
GAPDHP04406 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
GAPDHP04406 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GAPDHP04406 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GAPDHP04406 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GAPDHP04406 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GAPDHP04406 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GAPDHP04406 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
GAPDHP04406 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GAPDHP04406 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.08□□□□□ -0.16
GAPDHP04406 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.08□□□□□ -0.16
GAPDHP04406 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
GAPDHP04406 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms