Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCNKO75909 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCNKO75909 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCNKO75909 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
CCNKO75909 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCNKO75909 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCNKO75909 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCNKO75909 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.58□□□□□ -0.08
CCNKO75909 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCNKO75909 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCNKO75909 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.58□□□□□ -0.08
CCNKO75909 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCNKO75909 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCNKO75909 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.58□□□□□ -0.08
CCNKO75909 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCNKO75909 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCNKO75909 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.57□□□□□ -0.08
CCNKO75909 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.57□□□□□ -0.08
CCNKO75909 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCNKO75909 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCNKO75909 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCNKO75909 AC005252.3-201ENST00000623855 2258 ntBASIC14.57□□□□□ -0.08
CCNKO75909 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCNKO75909 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.57□□□□□ -0.08
CCNKO75909 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCNKO75909 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCNKO75909 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.57□□□□□ -0.08
CCNKO75909 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.57□□□□□ -0.08
CCNKO75909 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CCNKO75909 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.57□□□□□ -0.08
CCNKO75909 AC008040.2-201ENST00000461049 708 ntBASIC14.57□□□□□ -0.08
CCNKO75909 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.57□□□□□ -0.08
CCNKO75909 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.57□□□□□ -0.08
CCNKO75909 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC14.57□□□□□ -0.08
CCNKO75909 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.57□□□□□ -0.08
CCNKO75909 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.57□□□□□ -0.08
CCNKO75909 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCNKO75909 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.57□□□□□ -0.08
CCNKO75909 AC069544.1-201ENST00000609399 999 ntBASIC14.57□□□□□ -0.08
CCNKO75909 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
CCNKO75909 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.57□□□□□ -0.08
CCNKO75909 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CCNKO75909 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCNKO75909 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCNKO75909 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.57□□□□□ -0.08
CCNKO75909 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCNKO75909 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCNKO75909 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCNKO75909 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCNKO75909 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.57□□□□□ -0.08
CCNKO75909 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.57□□□□□ -0.08
CCNKO75909 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCNKO75909 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CCNKO75909 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CCNKO75909 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCNKO75909 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCNKO75909 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CCNKO75909 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCNKO75909 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCNKO75909 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.57□□□□□ -0.08
CCNKO75909 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.56□□□□□ -0.08
CCNKO75909 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCNKO75909 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CCNKO75909 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCNKO75909 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.56□□□□□ -0.08
CCNKO75909 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCNKO75909 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCNKO75909 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCNKO75909 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCNKO75909 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.56□□□□□ -0.08
CCNKO75909 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCNKO75909 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.56□□□□□ -0.08
CCNKO75909 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCNKO75909 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.56□□□□□ -0.08
CCNKO75909 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCNKO75909 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCNKO75909 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.56□□□□□ -0.08
CCNKO75909 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCNKO75909 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCNKO75909 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCNKO75909 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCNKO75909 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCNKO75909 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.56□□□□□ -0.08
CCNKO75909 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.56□□□□□ -0.08
CCNKO75909 AC004951.3-201ENST00000418645 1148 ntBASIC14.56□□□□□ -0.08
CCNKO75909 AC069152.1-201ENST00000438030 544 ntBASIC14.56□□□□□ -0.08
CCNKO75909 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC14.56□□□□□ -0.08
CCNKO75909 KRT16P5-201ENST00000455284 522 ntBASIC14.56□□□□□ -0.08
CCNKO75909 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.56□□□□□ -0.08
CCNKO75909 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
CCNKO75909 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.56□□□□□ -0.08
CCNKO75909 CKBP1-201ENST00000565489 1086 ntBASIC14.56□□□□□ -0.08
CCNKO75909 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CCNKO75909 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CCNKO75909 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CCNKO75909 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCNKO75909 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CCNKO75909 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CCNKO75909 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCNKO75909 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms