Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 AL590326.2-201ENST00000625139 305 ntBASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 MIR4492-201ENST00000581627 80 ntBASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 MPDU1-223ENST00000582151 728 ntBASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 NKAPP1-205ENST00000585790 367 ntBASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV9S1A1TA0A576 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
TCRBV9S1A1TA0A576 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 AL139288.1-201ENST00000623748 933 ntBASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 AL358472.4-201ENST00000633140 710 ntBASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV9S1A1TA0A576 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 AL603832.2-201ENST00000566195 2125 ntBASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms