Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGC4Q9Y5F7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGC4Q9Y5F7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGC4Q9Y5F7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
PCDHGC4Q9Y5F7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGC4Q9Y5F7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGC4Q9Y5F7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 MCCD1P2-201ENST00000423228 335 ntBASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 PRORSD1P-202ENST00000563365 2154 ntBASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 AC079328.2-201ENST00000561241 3354 ntBASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGC4Q9Y5F7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 BX842568.4-201ENST00000421222 227 ntBASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 AC092865.5-201ENST00000545435 363 ntBASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 AC068137.2-201ENST00000605408 478 ntBASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC4Q9Y5F7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms