Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 TUBB8P7-204ENST00000567960 1332 ntBASIC17.35■□□□□ 0.37
C9orf72Q96LT7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.35■□□□□ 0.37
C9orf72Q96LT7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf72Q96LT7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf72Q96LT7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf72Q96LT7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf72Q96LT7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf72Q96LT7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
C9orf72Q96LT7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf72Q96LT7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf72Q96LT7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
C9orf72Q96LT7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.35■□□□□ 0.37
C9orf72Q96LT7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf72Q96LT7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 AKR1C7P-201ENST00000305623 895 ntBASIC17.34■□□□□ 0.37
C9orf72Q96LT7 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 AC009533.2-201ENST00000543664 586 ntBASIC17.34■□□□□ 0.37
C9orf72Q96LT7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 MIR5100-201ENST00000579544 119 ntBASIC17.34■□□□□ 0.37
C9orf72Q96LT7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 AL121912.1-201ENST00000603683 238 ntBASIC17.34■□□□□ 0.37
C9orf72Q96LT7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.34■□□□□ 0.37
C9orf72Q96LT7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.33■□□□□ 0.37
C9orf72Q96LT7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
C9orf72Q96LT7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.33■□□□□ 0.37
C9orf72Q96LT7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.33■□□□□ 0.37
C9orf72Q96LT7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
C9orf72Q96LT7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
C9orf72Q96LT7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
C9orf72Q96LT7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.33■□□□□ 0.37
C9orf72Q96LT7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
C9orf72Q96LT7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
C9orf72Q96LT7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
C9orf72Q96LT7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
C9orf72Q96LT7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
C9orf72Q96LT7 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
C9orf72Q96LT7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
C9orf72Q96LT7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.33■□□□□ 0.36
C9orf72Q96LT7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C9orf72Q96LT7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
C9orf72Q96LT7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C9orf72Q96LT7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C9orf72Q96LT7 SAPCD2P3-201ENST00000455031 850 ntBASIC17.33■□□□□ 0.36
C9orf72Q96LT7 AC009078.2-202ENST00000463353 338 ntBASIC17.33■□□□□ 0.36
C9orf72Q96LT7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.33■□□□□ 0.36
C9orf72Q96LT7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.33■□□□□ 0.36
C9orf72Q96LT7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
C9orf72Q96LT7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
C9orf72Q96LT7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.33■□□□□ 0.36
C9orf72Q96LT7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
C9orf72Q96LT7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
C9orf72Q96LT7 AL591684.3-201ENST00000605187 298 ntBASIC17.33■□□□□ 0.36
C9orf72Q96LT7 AC114341.1-201ENST00000618070 349 ntBASIC17.33■□□□□ 0.36
C9orf72Q96LT7 REXO1L6P-202ENST00000619970 1078 ntBASIC17.33■□□□□ 0.36
C9orf72Q96LT7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.33■□□□□ 0.36
C9orf72Q96LT7 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C9orf72Q96LT7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
C9orf72Q96LT7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
C9orf72Q96LT7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
C9orf72Q96LT7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C9orf72Q96LT7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
C9orf72Q96LT7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
C9orf72Q96LT7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.33■□□□□ 0.36
C9orf72Q96LT7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
C9orf72Q96LT7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.33■□□□□ 0.36
C9orf72Q96LT7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms