Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5BP61020 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5BP61020 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5BP61020 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RAB5BP61020 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
RAB5BP61020 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5BP61020 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5BP61020 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB5BP61020 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RAB5BP61020 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB5BP61020 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB5BP61020 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB5BP61020 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5BP61020 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB5BP61020 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5BP61020 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5BP61020 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5BP61020 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5BP61020 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5BP61020 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5BP61020 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5BP61020 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5BP61020 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RAB5BP61020 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB5BP61020 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
RAB5BP61020 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB5BP61020 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB5BP61020 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5BP61020 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5BP61020 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB5BP61020 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB5BP61020 AC004854.2-201ENST00000608450 1441 ntBASIC13.15□□□□□ -0.3
RAB5BP61020 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB5BP61020 AP003680.1-201ENST00000598970 3660 ntBASIC13.15□□□□□ -0.3
RAB5BP61020 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5BP61020 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
RAB5BP61020 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5BP61020 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB5BP61020 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5BP61020 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5BP61020 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5BP61020 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5BP61020 NALT1-201ENST00000429224 738 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB5BP61020 BRI3-207ENST00000539286 699 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB5BP61020 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB5BP61020 AC124947.2-201ENST00000547118 1133 ntBASIC13.15□□□□□ -0.3
RAB5BP61020 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB5BP61020 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC13.15□□□□□ -0.3
RAB5BP61020 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
RAB5BP61020 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.15□□□□□ -0.3
RAB5BP61020 AC110285.6-201ENST00000617652 491 ntBASIC13.15□□□□□ -0.3
RAB5BP61020 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
RAB5BP61020 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5BP61020 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB5BP61020 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5BP61020 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
RAB5BP61020 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5BP61020 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RAB5BP61020 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5BP61020 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5BP61020 CICP8-201ENST00000455800 2813 ntBASIC13.15□□□□□ -0.3
RAB5BP61020 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RAB5BP61020 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5BP61020 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB5BP61020 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5BP61020 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5BP61020 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
RAB5BP61020 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
RAB5BP61020 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.15□□□□□ -0.31
RAB5BP61020 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
RAB5BP61020 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB5BP61020 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.14□□□□□ -0.31
RAB5BP61020 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB5BP61020 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.14□□□□□ -0.31
RAB5BP61020 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RAB5BP61020 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
RAB5BP61020 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB5BP61020 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB5BP61020 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB5BP61020 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB5BP61020 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB5BP61020 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB5BP61020 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB5BP61020 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.14□□□□□ -0.31
RAB5BP61020 AL390755.1-201ENST00000623716 2027 ntBASIC13.14□□□□□ -0.31
RAB5BP61020 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB5BP61020 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB5BP61020 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.14□□□□□ -0.31
RAB5BP61020 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB5BP61020 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.14□□□□□ -0.31
RAB5BP61020 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.14□□□□□ -0.31
RAB5BP61020 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB5BP61020 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.14□□□□□ -0.31
RAB5BP61020 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB5BP61020 AC069236.1-201ENST00000604339 616 ntBASIC13.14□□□□□ -0.31
RAB5BP61020 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB5BP61020 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RAB5BP61020 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB5BP61020 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB5BP61020 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms