Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBCP0CG48 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBCP0CG48 AC104819.1-201ENST00000504587 486 ntBASIC14.79□□□□□ -0.04
UBCP0CG48 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBCP0CG48 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBCP0CG48 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.79□□□□□ -0.04
UBCP0CG48 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.79□□□□□ -0.04
UBCP0CG48 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.79□□□□□ -0.04
UBCP0CG48 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.79□□□□□ -0.04
UBCP0CG48 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
UBCP0CG48 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.79□□□□□ -0.04
UBCP0CG48 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.79□□□□□ -0.04
UBCP0CG48 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.79□□□□□ -0.04
UBCP0CG48 AC006538.1-201ENST00000567905 1585 ntBASIC14.79□□□□□ -0.04
UBCP0CG48 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.79□□□□□ -0.04
UBCP0CG48 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBCP0CG48 AC092329.2-201ENST00000598402 547 ntBASIC14.79□□□□□ -0.04
UBCP0CG48 KRT8P49-201ENST00000604166 1432 ntBASIC14.79□□□□□ -0.04
UBCP0CG48 AC010331.1-201ENST00000611423 582 ntBASIC14.79□□□□□ -0.04
UBCP0CG48 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.79□□□□□ -0.04
UBCP0CG48 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBCP0CG48 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBCP0CG48 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBCP0CG48 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBCP0CG48 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.79□□□□□ -0.04
UBCP0CG48 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
UBCP0CG48 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
UBCP0CG48 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
UBCP0CG48 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
UBCP0CG48 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
UBCP0CG48 AC004817.3-201ENST00000602957 2129 ntBASIC14.78□□□□□ -0.04
UBCP0CG48 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
UBCP0CG48 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 AC068587.6-202ENST00000641839 5619 ntBASIC14.78□□□□□ -0.04
UBCP0CG48 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.78□□□□□ -0.04
UBCP0CG48 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.78□□□□□ -0.04
UBCP0CG48 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.78□□□□□ -0.04
UBCP0CG48 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
UBCP0CG48 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
UBCP0CG48 ABCD1P5-201ENST00000445663 754 ntBASIC14.78□□□□□ -0.04
UBCP0CG48 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.78□□□□□ -0.04
UBCP0CG48 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
UBCP0CG48 AL049597.2-201ENST00000565575 961 ntBASIC14.78□□□□□ -0.04
UBCP0CG48 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.78□□□□□ -0.04
UBCP0CG48 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.78□□□□□ -0.04
UBCP0CG48 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.78□□□□□ -0.04
UBCP0CG48 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 AL139011.1-202ENST00000642063 584 ntBASIC14.78□□□□□ -0.04
UBCP0CG48 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.78□□□□□ -0.04
UBCP0CG48 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.78□□□□□ -0.04
UBCP0CG48 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
UBCP0CG48 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
UBCP0CG48 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.78□□□□□ -0.04
UBCP0CG48 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBCP0CG48 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
UBCP0CG48 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
UBCP0CG48 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
UBCP0CG48 AC079776.2-201ENST00000641154 1609 ntBASIC14.77□□□□□ -0.04
UBCP0CG48 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBCP0CG48 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
UBCP0CG48 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
UBCP0CG48 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBCP0CG48 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
UBCP0CG48 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
UBCP0CG48 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.77□□□□□ -0.04
UBCP0CG48 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
UBCP0CG48 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBCP0CG48 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBCP0CG48 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.77□□□□□ -0.04
UBCP0CG48 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBCP0CG48 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBCP0CG48 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
UBCP0CG48 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
UBCP0CG48 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
UBCP0CG48 IER3-202ENST00000376377 1350 ntBASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms