Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AF238378.1-201ENST00000526806 358 ntBASIC17.09■□□□□ 0.33
TCRBV7S3A2A0A539 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.09■□□□□ 0.33
TCRBV7S3A2A0A539 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.09■□□□□ 0.33
TCRBV7S3A2A0A539 AC021087.4-201ENST00000563761 564 ntBASIC17.09■□□□□ 0.33
TCRBV7S3A2A0A539 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.09■□□□□ 0.33
TCRBV7S3A2A0A539 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.09■□□□□ 0.33
TCRBV7S3A2A0A539 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.09■□□□□ 0.33
TCRBV7S3A2A0A539 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.09■□□□□ 0.33
TCRBV7S3A2A0A539 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.09■□□□□ 0.33
TCRBV7S3A2A0A539 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.09■□□□□ 0.33
TCRBV7S3A2A0A539 SLC22A20-204ENST00000530038 1673 ntBASIC17.09■□□□□ 0.33
TCRBV7S3A2A0A539 PI4KAP1-204ENST00000612579 1703 ntBASIC17.09■□□□□ 0.33
TCRBV7S3A2A0A539 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV7S3A2A0A539 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV7S3A2A0A539 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV7S3A2A0A539 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV7S3A2A0A539 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.09■□□□□ 0.33
TCRBV7S3A2A0A539 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.09■□□□□ 0.33
TCRBV7S3A2A0A539 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TCRBV7S3A2A0A539 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TCRBV7S3A2A0A539 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TCRBV7S3A2A0A539 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.08■□□□□ 0.33
TCRBV7S3A2A0A539 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TCRBV7S3A2A0A539 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TCRBV7S3A2A0A539 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.08■□□□□ 0.33
TCRBV7S3A2A0A539 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.08■□□□□ 0.33
TCRBV7S3A2A0A539 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.08■□□□□ 0.33
TCRBV7S3A2A0A539 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TCRBV7S3A2A0A539 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TCRBV7S3A2A0A539 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TCRBV7S3A2A0A539 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 PMS2P1-201ENST00000431037 1228 ntBASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 AC091304.2-201ENST00000564639 760 ntBASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV7S3A2A0A539 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 AC012313.10-201ENST00000623509 926 ntBASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 AL365203.3-201ENST00000609742 2057 ntBASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms