Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 AL592309.1-201ENST00000443127 649 ntBASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 AC023141.5-201ENST00000458585 616 ntBASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN1Q9UMX0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.96■□□□□ 0.47
UBQLN1Q9UMX0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN1Q9UMX0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
UBQLN1Q9UMX0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN1Q9UMX0 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.96■□□□□ 0.47
UBQLN1Q9UMX0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN1Q9UMX0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN1Q9UMX0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.96■□□□□ 0.47
UBQLN1Q9UMX0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN1Q9UMX0 AL627223.1-201ENST00000416693 442 ntBASIC17.96■□□□□ 0.47
UBQLN1Q9UMX0 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.96■□□□□ 0.47
UBQLN1Q9UMX0 SPCS2P4-201ENST00000436160 681 ntBASIC17.96■□□□□ 0.47
UBQLN1Q9UMX0 METTL21AP1-201ENST00000438852 635 ntBASIC17.96■□□□□ 0.47
UBQLN1Q9UMX0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN1Q9UMX0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN1Q9UMX0 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.96■□□□□ 0.47
UBQLN1Q9UMX0 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.96■□□□□ 0.47
UBQLN1Q9UMX0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.96■□□□□ 0.47
UBQLN1Q9UMX0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.96■□□□□ 0.47
UBQLN1Q9UMX0 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.96■□□□□ 0.47
UBQLN1Q9UMX0 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN1Q9UMX0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
UBQLN1Q9UMX0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
UBQLN1Q9UMX0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.96■□□□□ 0.47
UBQLN1Q9UMX0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN1Q9UMX0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN1Q9UMX0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.96■□□□□ 0.47
UBQLN1Q9UMX0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
UBQLN1Q9UMX0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
UBQLN1Q9UMX0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
UBQLN1Q9UMX0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.96■□□□□ 0.46
UBQLN1Q9UMX0 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
UBQLN1Q9UMX0 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 TSEN15P1-201ENST00000423257 515 ntBASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 PMS2P2-201ENST00000425039 1128 ntBASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 AC005237.2-201ENST00000434368 219 ntBASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 KRT18P34-201ENST00000488218 1270 ntBASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 IGHV3-62-201ENST00000520057 340 ntBASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 KRT8P23-201ENST00000560090 1207 ntBASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.95■□□□□ 0.46
UBQLN1Q9UMX0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms