Protein–RNA interactions for Protein: Q9C035

TRIM5, Tripartite motif-containing protein 5, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM5Q9C035 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM5Q9C035 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM5Q9C035 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM5Q9C035 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TRIM5Q9C035 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRIM5Q9C035 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM5Q9C035 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM5Q9C035 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM5Q9C035 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM5Q9C035 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM5Q9C035 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRIM5Q9C035 AP002414.2-201ENST00000591780 3365 ntBASIC18.82■□□□□ 0.6
TRIM5Q9C035 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM5Q9C035 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM5Q9C035 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM5Q9C035 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM5Q9C035 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TRIM5Q9C035 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM5Q9C035 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM5Q9C035 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.82■□□□□ 0.6
TRIM5Q9C035 Z83836.1-201ENST00000624605 1642 ntBASIC18.82■□□□□ 0.6
TRIM5Q9C035 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TRIM5Q9C035 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
TRIM5Q9C035 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM5Q9C035 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM5Q9C035 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TRIM5Q9C035 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM5Q9C035 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 FAM220CP-201ENST00000395253 831 ntBASIC18.81■□□□□ 0.6
TRIM5Q9C035 COX11P1-201ENST00000489116 835 ntBASIC18.81■□□□□ 0.6
TRIM5Q9C035 AL603832.2-201ENST00000566195 2125 ntBASIC18.81■□□□□ 0.6
TRIM5Q9C035 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM5Q9C035 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM5Q9C035 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
TRIM5Q9C035 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM5Q9C035 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM5Q9C035 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM5Q9C035 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM5Q9C035 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.8■□□□□ 0.6
TRIM5Q9C035 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRIM5Q9C035 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM5Q9C035 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM5Q9C035 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM5Q9C035 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRIM5Q9C035 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM5Q9C035 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRIM5Q9C035 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM5Q9C035 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM5Q9C035 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM5Q9C035 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM5Q9C035 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM5Q9C035 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM5Q9C035 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM5Q9C035 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.8■□□□□ 0.6
TRIM5Q9C035 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM5Q9C035 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.8■□□□□ 0.6
TRIM5Q9C035 SLC25A3P1-201ENST00000443844 931 ntBASIC18.8■□□□□ 0.6
TRIM5Q9C035 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
TRIM5Q9C035 FLJ16779-201ENST00000612722 7638 ntBASIC18.8■□□□□ 0.6
TRIM5Q9C035 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM5Q9C035 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM5Q9C035 LINC00895-201ENST00000629028 1637 ntBASIC18.8■□□□□ 0.6
TRIM5Q9C035 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM5Q9C035 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRIM5Q9C035 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM5Q9C035 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM5Q9C035 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRIM5Q9C035 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM5Q9C035 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM5Q9C035 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRIM5Q9C035 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM5Q9C035 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms