Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 IGHV3-42-201ENST00000520410 361 ntBASIC16.81■□□□□ 0.28
SIPA1Q96FS4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 AC138761.1-201ENST00000584393 385 ntBASIC16.81■□□□□ 0.28
SIPA1Q96FS4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIPA1Q96FS4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 FO538757.1-201ENST00000623083 1397 ntBASIC16.8■□□□□ 0.28
SIPA1Q96FS4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 TREML5P-201ENST00000421694 576 ntBASIC16.8■□□□□ 0.28
SIPA1Q96FS4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.8■□□□□ 0.28
SIPA1Q96FS4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 MIR4492-201ENST00000581627 80 ntBASIC16.8■□□□□ 0.28
SIPA1Q96FS4 LINC00896-202ENST00000609602 2128 ntBASIC16.8■□□□□ 0.28
SIPA1Q96FS4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIPA1Q96FS4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms