Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.61■□□□□ 0.41
FOXR1Q6PIV2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
FOXR1Q6PIV2 AC006538.3-201ENST00000612495 578 ntBASIC17.61■□□□□ 0.41
FOXR1Q6PIV2 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.61■□□□□ 0.41
FOXR1Q6PIV2 AC004263.2-201ENST00000617183 678 ntBASIC17.61■□□□□ 0.41
FOXR1Q6PIV2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FOXR1Q6PIV2 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
FOXR1Q6PIV2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FOXR1Q6PIV2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.61■□□□□ 0.41
FOXR1Q6PIV2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FOXR1Q6PIV2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
FOXR1Q6PIV2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FOXR1Q6PIV2 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FOXR1Q6PIV2 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FOXR1Q6PIV2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.61■□□□□ 0.41
FOXR1Q6PIV2 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
FOXR1Q6PIV2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 IGHGP-201ENST00000390555 1178 ntBASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 AL590627.1-203ENST00000421194 1026 ntBASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 NSUN5P1-202ENST00000421140 1535 ntBASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 NSUN5P2-203ENST00000457352 1529 ntBASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 AC073347.1-201ENST00000421633 2643 ntBASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 AC104581.4-201ENST00000623126 3052 ntBASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.6■□□□□ 0.41
FOXR1Q6PIV2 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 CICP4-201ENST00000447359 2812 ntBASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 AL009178.2-201ENST00000597278 2719 ntBASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
FOXR1Q6PIV2 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
FOXR1Q6PIV2 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
FOXR1Q6PIV2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
FOXR1Q6PIV2 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
FOXR1Q6PIV2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.58■□□□□ 0.41
FOXR1Q6PIV2 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
FOXR1Q6PIV2 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
FOXR1Q6PIV2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
FOXR1Q6PIV2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXR1Q6PIV2 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FOXR1Q6PIV2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms