Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GFRA1P56159 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
GFRA1P56159 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
GFRA1P56159 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GFRA1P56159 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.02■□□□□ -0
GFRA1P56159 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.02■□□□□ -0
GFRA1P56159 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
GFRA1P56159 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
GFRA1P56159 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GFRA1P56159 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.02■□□□□ -0
GFRA1P56159 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.02■□□□□ -0
GFRA1P56159 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.02■□□□□ -0
GFRA1P56159 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.02■□□□□ -0
GFRA1P56159 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.02■□□□□ -0
GFRA1P56159 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.02■□□□□ -0
GFRA1P56159 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.02■□□□□ -0
GFRA1P56159 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.02■□□□□ -0
GFRA1P56159 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
GFRA1P56159 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
GFRA1P56159 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
GFRA1P56159 AC016027.1-202ENST00000607927 1699 ntBASIC15.02□□□□□ -0.01
GFRA1P56159 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
GFRA1P56159 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
GFRA1P56159 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.02□□□□□ -0.01
GFRA1P56159 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
GFRA1P56159 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
GFRA1P56159 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
GFRA1P56159 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GFRA1P56159 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.02□□□□□ -0.01
GFRA1P56159 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.02□□□□□ -0.01
GFRA1P56159 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
GFRA1P56159 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.02□□□□□ -0.01
GFRA1P56159 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
GFRA1P56159 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GFRA1P56159 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GFRA1P56159 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GFRA1P56159 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GFRA1P56159 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
GFRA1P56159 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.01□□□□□ -0.01
GFRA1P56159 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.01□□□□□ -0.01
GFRA1P56159 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
GFRA1P56159 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
GFRA1P56159 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GFRA1P56159 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.01□□□□□ -0.01
GFRA1P56159 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GFRA1P56159 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
GFRA1P56159 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GFRA1P56159 AC005915.1-201ENST00000624912 2018 ntBASIC15.01□□□□□ -0.01
GFRA1P56159 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.01□□□□□ -0.01
GFRA1P56159 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.01□□□□□ -0.01
GFRA1P56159 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.01□□□□□ -0.01
GFRA1P56159 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.01□□□□□ -0.01
GFRA1P56159 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.01□□□□□ -0.01
GFRA1P56159 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.01□□□□□ -0.01
GFRA1P56159 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GFRA1P56159 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
GFRA1P56159 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
GFRA1P56159 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GFRA1P56159 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
GFRA1P56159 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
GFRA1P56159 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GFRA1P56159 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GFRA1P56159 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GFRA1P56159 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GFRA1P56159 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GFRA1P56159 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.01□□□□□ -0.01
GFRA1P56159 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GFRA1P56159 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.01□□□□□ -0.01
GFRA1P56159 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GFRA1P56159 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GFRA1P56159 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GFRA1P56159 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15□□□□□ -0.01
GFRA1P56159 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15□□□□□ -0.01
GFRA1P56159 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
GFRA1P56159 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
GFRA1P56159 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
GFRA1P56159 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15□□□□□ -0.01
GFRA1P56159 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
GFRA1P56159 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
GFRA1P56159 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GFRA1P56159 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
GFRA1P56159 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15□□□□□ -0.01
GFRA1P56159 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15□□□□□ -0.01
GFRA1P56159 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
GFRA1P56159 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15□□□□□ -0.01
GFRA1P56159 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15□□□□□ -0.01
GFRA1P56159 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
GFRA1P56159 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GFRA1P56159 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GFRA1P56159 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15□□□□□ -0.01
GFRA1P56159 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GFRA1P56159 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15□□□□□ -0.01
GFRA1P56159 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GFRA1P56159 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15□□□□□ -0.01
GFRA1P56159 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15□□□□□ -0.01
GFRA1P56159 SPCS2P4-201ENST00000436160 681 ntBASIC15□□□□□ -0.01
GFRA1P56159 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15□□□□□ -0.01
GFRA1P56159 LINC01225-203ENST00000563550 1244 ntBASIC15□□□□□ -0.01
GFRA1P56159 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
GFRA1P56159 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms