Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 SPDYE15P-201ENST00000424157 909 ntBASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 AC005332.3-201ENST00000589904 676 ntBASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 AL390719.2-201ENST00000606993 987 ntBASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM42Q8IWZ5 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 AL359075.1-203ENST00000462729 1002 ntBASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 AL353593.2-201ENST00000602529 1483 ntBASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM42Q8IWZ5 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms