Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 INGX-201ENST00000359239 846 ntBASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 MIR1238-201ENST00000408483 83 ntBASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 AL845331.1-201ENST00000424978 1190 ntBASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 GCSHP5-201ENST00000443090 522 ntBASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 MIR4785-201ENST00000585005 73 ntBASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 Z99916.2-201ENST00000604037 246 ntBASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 HLA-A-202ENST00000376806 1854 ntBASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SSBP4Q9BWG4 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 AC096633.1-201ENST00000422446 749 ntBASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 AC098590.1-201ENST00000468126 897 ntBASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 AC124947.2-201ENST00000547118 1133 ntBASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 MME-217ENST00000616757 1315 ntTSL 5 BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms