Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FOXB1Q99853 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.86□□□□□ -0.03
FOXB1Q99853 VN2R19P-201ENST00000442399 1052 ntBASIC14.86□□□□□ -0.03
FOXB1Q99853 RPL13AP23-201ENST00000480739 586 ntBASIC14.86□□□□□ -0.03
FOXB1Q99853 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.86□□□□□ -0.03
FOXB1Q99853 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.86□□□□□ -0.03
FOXB1Q99853 AC005412.3-201ENST00000580309 715 ntBASIC14.86□□□□□ -0.03
FOXB1Q99853 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.86□□□□□ -0.03
FOXB1Q99853 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.86□□□□□ -0.03
FOXB1Q99853 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
FOXB1Q99853 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.86□□□□□ -0.03
FOXB1Q99853 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.86□□□□□ -0.03
FOXB1Q99853 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.86□□□□□ -0.03
FOXB1Q99853 AC009053.2-201ENST00000563701 2365 ntBASIC14.86□□□□□ -0.03
FOXB1Q99853 NKILA-202ENST00000614771 2598 ntBASIC14.86□□□□□ -0.03
FOXB1Q99853 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.86□□□□□ -0.03
FOXB1Q99853 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FOXB1Q99853 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
FOXB1Q99853 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
FOXB1Q99853 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
FOXB1Q99853 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.86□□□□□ -0.03
FOXB1Q99853 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FOXB1Q99853 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.86□□□□□ -0.03
FOXB1Q99853 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.86□□□□□ -0.03
FOXB1Q99853 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
FOXB1Q99853 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FOXB1Q99853 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FOXB1Q99853 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
FOXB1Q99853 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
FOXB1Q99853 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.85□□□□□ -0.03
FOXB1Q99853 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.85□□□□□ -0.03
FOXB1Q99853 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
FOXB1Q99853 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.85□□□□□ -0.03
FOXB1Q99853 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
FOXB1Q99853 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.85□□□□□ -0.03
FOXB1Q99853 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.85□□□□□ -0.03
FOXB1Q99853 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
FOXB1Q99853 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
FOXB1Q99853 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.85□□□□□ -0.03
FOXB1Q99853 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.85□□□□□ -0.03
FOXB1Q99853 AL353732.1-201ENST00000569618 1459 ntBASIC14.85□□□□□ -0.03
FOXB1Q99853 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.85□□□□□ -0.03
FOXB1Q99853 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.85□□□□□ -0.03
FOXB1Q99853 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.85□□□□□ -0.03
FOXB1Q99853 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.85□□□□□ -0.03
FOXB1Q99853 MPDU1-223ENST00000582151 728 ntBASIC14.85□□□□□ -0.03
FOXB1Q99853 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.85□□□□□ -0.03
FOXB1Q99853 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
FOXB1Q99853 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.85□□□□□ -0.03
FOXB1Q99853 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
FOXB1Q99853 AC078925.2-201ENST00000624013 1973 ntBASIC14.85□□□□□ -0.03
FOXB1Q99853 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.85□□□□□ -0.03
FOXB1Q99853 RNF216P1-203ENST00000404404 2427 ntBASIC14.85□□□□□ -0.03
FOXB1Q99853 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.85□□□□□ -0.03
FOXB1Q99853 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.85□□□□□ -0.03
FOXB1Q99853 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FOXB1Q99853 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
FOXB1Q99853 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.85□□□□□ -0.03
FOXB1Q99853 ZNF259P1-201ENST00000407656 1365 ntBASIC14.85□□□□□ -0.03
FOXB1Q99853 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.85□□□□□ -0.03
FOXB1Q99853 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.85□□□□□ -0.03
FOXB1Q99853 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FOXB1Q99853 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FOXB1Q99853 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.84□□□□□ -0.03
FOXB1Q99853 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.84□□□□□ -0.03
FOXB1Q99853 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FOXB1Q99853 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FOXB1Q99853 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.84□□□□□ -0.03
FOXB1Q99853 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
FOXB1Q99853 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.84□□□□□ -0.03
FOXB1Q99853 AC011676.5-201ENST00000624864 2660 ntBASIC14.84□□□□□ -0.03
FOXB1Q99853 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
FOXB1Q99853 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms