Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 TMPOP1-202ENST00000424642 1267 ntBASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 AL845331.1-201ENST00000424978 1190 ntBASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 VENTXP7-201ENST00000475503 772 ntBASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 AC009533.2-201ENST00000543664 586 ntBASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 AC005336.2-201ENST00000593183 939 ntBASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 AL121956.5-201ENST00000625261 221 ntBASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 HLA-A-202ENST00000376806 1854 ntBASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.92□□□□□ -0.02
DNAAF1Q8NEP3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms