Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 KRT8P49-201ENST00000604166 1432 ntBASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 IGLL3P-201ENST00000412472 434 ntBASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 AL121761.2-201ENST00000598007 1648 ntBASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD3Q7Z3D4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 HCG4B-203ENST00000450128 991 ntBASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 AL671883.3-201ENST00000603274 991 ntBASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 AC006538.3-201ENST00000612495 578 ntBASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 TOP3BP1-201ENST00000420768 1380 ntBASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
LYSMD3Q7Z3D4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 AC129492.6-201ENST00000611383 1305 ntBASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 AC064836.3-201ENST00000607928 673 ntBASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
LYSMD3Q7Z3D4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms