Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 AC126177.1-201ENST00000547829 2218 ntBASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 SNX18-202ENST00000343017 3140 ntBASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 AC100803.2-201ENST00000562459 1963 ntBASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 NFIC-211ENST00000641145 8399 ntBASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM53Q6P2H8 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 AC138035.3-201ENST00000622706 2791 ntBASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 DRAXINP1-201ENST00000437611 948 ntBASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 LINC00265-3P-201ENST00000447588 903 ntBASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms