Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.05■□□□□ 0.32
CHRNA4P43681 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CHRNA4P43681 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.05■□□□□ 0.32
CHRNA4P43681 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.05■□□□□ 0.32
CHRNA4P43681 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA4P43681 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA4P43681 LINC00895-201ENST00000629028 1637 ntBASIC17.04■□□□□ 0.32
CHRNA4P43681 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA4P43681 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA4P43681 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA4P43681 HLA-A-202ENST00000376806 1854 ntBASIC17.04■□□□□ 0.32
CHRNA4P43681 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.04■□□□□ 0.32
CHRNA4P43681 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA4P43681 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.04■□□□□ 0.32
CHRNA4P43681 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA4P43681 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA4P43681 AC108751.1-201ENST00000490852 363 ntBASIC17.04■□□□□ 0.32
CHRNA4P43681 AC079776.4-201ENST00000511039 504 ntBASIC17.04■□□□□ 0.32
CHRNA4P43681 IGHV3-22-201ENST00000520721 359 ntBASIC17.04■□□□□ 0.32
CHRNA4P43681 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.04■□□□□ 0.32
CHRNA4P43681 UNC93B6-202ENST00000528242 690 ntBASIC17.04■□□□□ 0.32
CHRNA4P43681 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.04■□□□□ 0.32
CHRNA4P43681 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CHRNA4P43681 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.04■□□□□ 0.32
CHRNA4P43681 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CHRNA4P43681 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA4P43681 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA4P43681 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.04■□□□□ 0.32
CHRNA4P43681 PGM5P2-202ENST00000637225 1043 ntBASIC17.04■□□□□ 0.32
CHRNA4P43681 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA4P43681 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CHRNA4P43681 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA4P43681 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.04■□□□□ 0.32
CHRNA4P43681 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA4P43681 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.04■□□□□ 0.32
CHRNA4P43681 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA4P43681 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.04■□□□□ 0.32
CHRNA4P43681 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA4P43681 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.04■□□□□ 0.32
CHRNA4P43681 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA4P43681 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA4P43681 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CHRNA4P43681 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA4P43681 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.04■□□□□ 0.32
CHRNA4P43681 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA4P43681 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.04■□□□□ 0.32
CHRNA4P43681 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.04■□□□□ 0.32
CHRNA4P43681 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA4P43681 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CHRNA4P43681 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA4P43681 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.03■□□□□ 0.32
CHRNA4P43681 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRNA4P43681 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA4P43681 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CHRNA4P43681 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRNA4P43681 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.03■□□□□ 0.32
CHRNA4P43681 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA4P43681 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA4P43681 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CHRNA4P43681 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA4P43681 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA4P43681 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CHRNA4P43681 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRNA4P43681 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.03■□□□□ 0.32
CHRNA4P43681 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.03■□□□□ 0.32
CHRNA4P43681 PMS2P1-201ENST00000431037 1228 ntBASIC17.03■□□□□ 0.32
CHRNA4P43681 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRNA4P43681 AC093909.1-201ENST00000504731 1122 ntBASIC17.03■□□□□ 0.32
CHRNA4P43681 RNA5SP415-201ENST00000517246 115 ntBASIC17.03■□□□□ 0.32
CHRNA4P43681 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRNA4P43681 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.03■□□□□ 0.32
CHRNA4P43681 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA4P43681 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.03■□□□□ 0.32
CHRNA4P43681 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.03■□□□□ 0.32
CHRNA4P43681 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA4P43681 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA4P43681 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA4P43681 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRNA4P43681 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CHRNA4P43681 SLC22A20-204ENST00000530038 1673 ntBASIC17.03■□□□□ 0.32
CHRNA4P43681 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA4P43681 AL118508.1-201ENST00000613502 2345 ntBASIC17.03■□□□□ 0.32
CHRNA4P43681 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA4P43681 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA4P43681 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA4P43681 AC006277.1-201ENST00000624348 1610 ntBASIC17.03■□□□□ 0.32
CHRNA4P43681 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRNA4P43681 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.02■□□□□ 0.32
CHRNA4P43681 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CHRNA4P43681 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNA4P43681 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNA4P43681 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNA4P43681 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.02■□□□□ 0.32
CHRNA4P43681 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
CHRNA4P43681 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.02■□□□□ 0.32
CHRNA4P43681 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNA4P43681 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNA4P43681 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CHRNA4P43681 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CHRNA4P43681 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms